EST details — SGN-E546639
| Search information |
| Request: 546639 | Match: SGN-E546639 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194164 | Clone name: TUS-70-B18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102913 [cLHT-32-D15] | Trace: SGN-T172010 | EST: SGN-E358040 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194164 [TUS-70-B18] | Trace: SGN-T350279 | EST: SGN-E549404 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546639 | Length: 774 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546639 [] (trimmed)
GTGGTTGTCATTTTAGTGGGATGGTTCTTCAACTACCCTTTAAACTATTTTATTGATCAAGAATGGTAGAGCTCTTGAACAACAGTTTTCGTCAG
TTCTCGTTGAACTCTATCAAGATTACGTCTTTTAGAGCAAATGAAGCAAGAACATTAACGCCAAGGCCGTTCCAGTGCTTGTTAAGTGAAGATAA
GCAACGGGTTATAGTTAAGAATGGGAAAGATTCACTGGATATATGTAGAGTTGTCAATGGGATGTGGCAGACTAGTGGTGGATGGGGAAGAATTG
AACGAGACAGTGCAGTTGATGCTATGCTTCAGTATGCTGATGCTGGACTCAACACTTTTGACTTGGCTGATATATATGGACCTGCTGAAGATCTT
TATGGCATCTTCATTAACAGAGTACGTAGAGAGCGCCCACCAGAACTTCTAGAAACTGTGAGAGGTCTTACCAAATGGGTGCCGCCACCAGTCAA
GATGACCCGCAGTTTTGTCAGTGAGAGCATTGATGTTTCAAGAAGGAGGATGGATGTTGCAGCCTTGGACATGCTTCAATTTCATTGGTGGGACT
ACTCTAATCCTGGATACTTAGACGCACTAAAGCACCTCACGGATCTCAAAGGAGAAGGCAAGATTAAGACCATTGCTCTGACTAATTTTGACACC
GAGAGATTAAGGATCATTCTGGAAAATGGGATTCCGGTTGTTAGCAATCAGGTACAACATTCAATTGTTGACATGCGTCCTCAACAGAAAATGGC
TGAGCTTTGTCAGC
TTCTCGTTGAACTCTATCAAGATTACGTCTTTTAGAGCAAATGAAGCAAGAACATTAACGCCAAGGCCGTTCCAGTGCTTGTTAAGTGAAGATAA
GCAACGGGTTATAGTTAAGAATGGGAAAGATTCACTGGATATATGTAGAGTTGTCAATGGGATGTGGCAGACTAGTGGTGGATGGGGAAGAATTG
AACGAGACAGTGCAGTTGATGCTATGCTTCAGTATGCTGATGCTGGACTCAACACTTTTGACTTGGCTGATATATATGGACCTGCTGAAGATCTT
TATGGCATCTTCATTAACAGAGTACGTAGAGAGCGCCCACCAGAACTTCTAGAAACTGTGAGAGGTCTTACCAAATGGGTGCCGCCACCAGTCAA
GATGACCCGCAGTTTTGTCAGTGAGAGCATTGATGTTTCAAGAAGGAGGATGGATGTTGCAGCCTTGGACATGCTTCAATTTCATTGGTGGGACT
ACTCTAATCCTGGATACTTAGACGCACTAAAGCACCTCACGGATCTCAAAGGAGAAGGCAAGATTAAGACCATTGCTCTGACTAATTTTGACACC
GAGAGATTAAGGATCATTCTGGAAAATGGGATTCCGGTTGTTAGCAATCAGGTACAACATTCAATTGTTGACATGCGTCCTCAACAGAAAATGGC
TGAGCTTTGTCAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546639] | SGN-U567429 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347514 [Download][View] | Facility Assigned ID: TUS70B18_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
