EST details — SGN-E546742
| Search information |
| Request: 546742 | Match: SGN-E546742 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194224 | Clone name: TUS-70-E6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C105952 [cLPP-1-G1] | Trace: SGN-T174577 | EST: SGN-E362516 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194224 [TUS-70-E6] | Trace: SGN-T347616 | EST: SGN-E546741 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546742 | Length: 643 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546742 [] (trimmed)
GCTCCATTTCCCCTCTAATTTGCCTAAAAAGAAAGCAAAGTAAAAGGAAATGGAGATGTCAAAGCTTTCAACTTTTGTTGTGTTCTTGGTTTTAG
GCTTAGCCCATTCTTCATTGGCCCAAAATTTGCCCCAAGACATTGTTGTAGTCCACAACAAGGCCCGTGCTGAAGTTGGTGTGCCACTTCCACCC
CTAAAATGGAACGATACGCTTGCTGCTTATGCCCATGAATATGCCACCACTAGATTAGGTGAATGCACATTGGTGCATTCAGATTCACCCTATGG
TGAAAATCTTGCAATGGGCTCCGGGGATTTTACCGCGGTGCAGGCAGTTAATTTGTGGGTGGGAGAGAAAAAGAACTACGATTATGCATCTAACA
CTTGTAGAGAAGGTATGTGCGGACATTATACTCAAGTTGTTTGGAAAAATACCCAACAAGTTGGATGCGCTAGATTGAAATGCTCGAATGGTGAA
TGGTGGTTTGTGTCATGCAACTATTACCCACCTGGAAATTACATCGGCGAGAAACCTTATTAAGTGATTGATTAATCAATTACGATGCATGGTTT
AAAAACAAAAAAATATTCGTAATTAAATTACTATTATACCATGCAAGTCAAGTATATATGTAATGGAATGGTA
GCTTAGCCCATTCTTCATTGGCCCAAAATTTGCCCCAAGACATTGTTGTAGTCCACAACAAGGCCCGTGCTGAAGTTGGTGTGCCACTTCCACCC
CTAAAATGGAACGATACGCTTGCTGCTTATGCCCATGAATATGCCACCACTAGATTAGGTGAATGCACATTGGTGCATTCAGATTCACCCTATGG
TGAAAATCTTGCAATGGGCTCCGGGGATTTTACCGCGGTGCAGGCAGTTAATTTGTGGGTGGGAGAGAAAAAGAACTACGATTATGCATCTAACA
CTTGTAGAGAAGGTATGTGCGGACATTATACTCAAGTTGTTTGGAAAAATACCCAACAAGTTGGATGCGCTAGATTGAAATGCTCGAATGGTGAA
TGGTGGTTTGTGTCATGCAACTATTACCCACCTGGAAATTACATCGGCGAGAAACCTTATTAAGTGATTGATTAATCAATTACGATGCATGGTTT
AAAAACAAAAAAATATTCGTAATTAAATTACTATTATACCATGCAAGTCAAGTATATATGTAATGGAATGGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546742] | SGN-U575695 | Tomato 200607 | Build 2 | 129 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347617 [Download][View] | Facility Assigned ID: TUS70E06_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
