EST details — SGN-E546747
| Search information |
| Request: 546747 | Match: SGN-E546747 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194227 | Clone name: TUS-70-E9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C105958 [cLPP-1-G15] | Trace: SGN-T174732 | EST: SGN-E362671 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194227 [TUS-70-E9] | Trace: SGN-T350297 | EST: SGN-E549422 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546747 | Length: 776 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546747 [] (trimmed)
GGGAAGGCGAGGATTTTCGCTGGTCTTTTTCTTATTTGCATTGTCCTCCCTTCGCTGGCCTCAGCGTTTGTAGATCATCTACCTGAAGTTGGCCA
AGTAAACGATAACAATGATGTACCGATCCATGTTAGTACTGTTGCTCACTTCAGCGAAAATCAAGTTAAGGAGGCATTGATAAGAAGGGCAAAGG
CAGTGCAAGATCTGTGGGCAAATTTTGGTAATGATGATAAGAATGATGTAGCTAAAGAAGATGCTGCACCTGTAACTCCAACGCCTGTTGATTCA
ACACCTACAACTACACCTGTTGATCCAACTCCAACGCCTGTTGATCCAACACCTAATCCTGGGCCTGTTAACCCTGTTCCAGCTGATCCAACACC
TAATCCTGTGCCTGCTAACAATGTACCTGCAGGATATCCAGGAGCAACTCAAGGGCCGCCTGTGGCGATGGGATATGGGGGTGCACCTATAACAC
AAAATCCATCAGACCAACAAACTGTGCCTGAACAGGCAGGTGCTGCTCAGAACCATCCAACACCGGAAGAAATTAAAGAGCAGCGCAAACATGCT
GGATTACAAGTGGGATTTTACGATAACACTTGCCCGAATGCTGAGAAGATCATTAAGGATGGAATGAACAGAGCTTTTGGGAATGATTCCAGCAT
GGCTGCTCCAATTGGGCGTCTTCTGTTCCATGATTGCTTTGTCAATGGATGTGATGCGTCTATACTCTTAGACAAGACACCAAGTGGTGCAAGGG
TAGAAAAACTTGCCCC
AGTAAACGATAACAATGATGTACCGATCCATGTTAGTACTGTTGCTCACTTCAGCGAAAATCAAGTTAAGGAGGCATTGATAAGAAGGGCAAAGG
CAGTGCAAGATCTGTGGGCAAATTTTGGTAATGATGATAAGAATGATGTAGCTAAAGAAGATGCTGCACCTGTAACTCCAACGCCTGTTGATTCA
ACACCTACAACTACACCTGTTGATCCAACTCCAACGCCTGTTGATCCAACACCTAATCCTGGGCCTGTTAACCCTGTTCCAGCTGATCCAACACC
TAATCCTGTGCCTGCTAACAATGTACCTGCAGGATATCCAGGAGCAACTCAAGGGCCGCCTGTGGCGATGGGATATGGGGGTGCACCTATAACAC
AAAATCCATCAGACCAACAAACTGTGCCTGAACAGGCAGGTGCTGCTCAGAACCATCCAACACCGGAAGAAATTAAAGAGCAGCGCAAACATGCT
GGATTACAAGTGGGATTTTACGATAACACTTGCCCGAATGCTGAGAAGATCATTAAGGATGGAATGAACAGAGCTTTTGGGAATGATTCCAGCAT
GGCTGCTCCAATTGGGCGTCTTCTGTTCCATGATTGCTTTGTCAATGGATGTGATGCGTCTATACTCTTAGACAAGACACCAAGTGGTGCAAGGG
TAGAAAAACTTGCCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546747] | SGN-U568268 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347622 [Download][View] | Facility Assigned ID: TUS70E09_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
