EST details — SGN-E547395
| Search information |
| Request: 547395 | Match: SGN-E547395 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194604 | Clone name: TUS-71-E2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C103920 [cLPP-12-F8] | Trace: SGN-T175068 | EST: SGN-E361869 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194604 [TUS-71-E2] | Trace: SGN-T348269 | EST: SGN-E547394 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547395 | Length: 813 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547395 [] (trimmed)
GCTCTTTCTCTTTTCTCTCTTTGTTTATTTGTTCATCATCATCTTCATAATAATTTTTCTTTTGCCCTTTTAGCTTAGTCCCCATAATACAATGG
GGAACTGTTGTTCAAGGGGCCAACCTAATAATGATGATGATGATCATATTATGAGTAAAGAAAAATCCAATGATAATGATCAATCAAAAAGTTGT
AATAATAATAATACTACACCACCAAAATCTCCTGACCCTTCTTCAAAACCATCTAAAAAATCCCCTATAGGTCCAGTATTAGGAAGACCAATGGA
AGATGTTAAAAAAACATATTCTATAGGTAAAGAATTAGGAAGGGGTCAATTTGGTGTAACACATTTATGTACACATAAACAAAATGGTGAACAAT
TTGCATGTAAAACAATAGCAAAAAGGAAGTTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGAGAAGTACAAATAATGCATCATTTAACAGGT
CAACAAAATATTGTTGAACTTAAAGGTGCTTATGAGGACAAACATTCAGTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGATAG
GATTATTACTAAAGGACATTATACTGAAAGGGCTGCTGCTACTTTGCTTAGAACTATTGTTCAAATTGTACATACTTGTCATTCTATGGGTGTTA
TTCATAGAGATCTCAAGCCTGAGAATTTTCTTCTTCTTAATAAAGATGAGGATTCACCCTCTCAGGCTACCGATTTCGGTCTTTCTGTCTTTTAT
AAACAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATTGCACCT
GGAACTGTTGTTCAAGGGGCCAACCTAATAATGATGATGATGATCATATTATGAGTAAAGAAAAATCCAATGATAATGATCAATCAAAAAGTTGT
AATAATAATAATACTACACCACCAAAATCTCCTGACCCTTCTTCAAAACCATCTAAAAAATCCCCTATAGGTCCAGTATTAGGAAGACCAATGGA
AGATGTTAAAAAAACATATTCTATAGGTAAAGAATTAGGAAGGGGTCAATTTGGTGTAACACATTTATGTACACATAAACAAAATGGTGAACAAT
TTGCATGTAAAACAATAGCAAAAAGGAAGTTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGAGAAGTACAAATAATGCATCATTTAACAGGT
CAACAAAATATTGTTGAACTTAAAGGTGCTTATGAGGACAAACATTCAGTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGATAG
GATTATTACTAAAGGACATTATACTGAAAGGGCTGCTGCTACTTTGCTTAGAACTATTGTTCAAATTGTACATACTTGTCATTCTATGGGTGTTA
TTCATAGAGATCTCAAGCCTGAGAATTTTCTTCTTCTTAATAAAGATGAGGATTCACCCTCTCAGGCTACCGATTTCGGTCTTTCTGTCTTTTAT
AAACAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATTGCACCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547395] | SGN-U566108 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348270 [Download][View] | Facility Assigned ID: TUS71E02_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |
Working
