EST details — SGN-E547820
| Search information |
| Request: 547820 | Match: SGN-E547820 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194852 | Clone name: TUS-71-O10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C106197 [cLPP-20-E14] | Trace: SGN-T177411 | EST: SGN-E364283 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194852 [TUS-71-O10] | Trace: SGN-T348696 | EST: SGN-E547821 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547820 | Length: 788 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547820 [] (trimmed)
AAGTTAATAAACCACATTTTACATTTCACAAAAACAGTTGTCTGACAAAAGAGGAGGAAAATGATTTTGCCTTCCGAGTAGTCCTTTCCGAGAAA
CTGAGTATGGATTAATTAGTTTACAAAGTACAAAATGTCTAAGAATGCAGAGGCTTCAATTTTCTTCCGTCCATCACTGCTACTCCTTCGGATTC
AGCATTTTTTCCCCTTTCTGATTGAACCATTTATAAAATAATACTCGTCCTTTAACAATTGGACAATCTTTGGTTCAACCAGTCGATTATTTCCT
GCATGATTTCTTCTCTTTCAAGTTCAAAGAGCAGGTCATGTAGCAACCCTTTATACAGCTTGATACTTTTATCAGTTGAAGAAGCCTCTTCGTAG
AGCTTCTTAGAGCCTTCAGGGTCGGTGACTGCATCATCGGAGCCATGAAGGACTAGGAATGGTACTGTCAACTTGCACAGATTCTGTTGCAAGTA
GGAAGTTATCCGAAGGATCTCGTAACCTGTTCGTACCCTAATGGATCCAGTGAATACTAGTGGGTCAGAGTACTTGGCGAGTAATGCTGCAGGAT
CCCTAGACACTGCAGCACCCCTTTTGTTTGCTGCACTGAACTGGTATCTTGGGAATAAAAATGAGAAAATTGGAGCAAGTACTGTGAAAATCGGA
TGAGCTGGTTGAACTCCAACGGCAGGTGAAGTCAATACAACACCATCAATCCTAGATTCTACCTTTTGATCAATTGCTGCCTTGAGGATTATAGC
TGCACCAGTAGAATGTCCAAAGCAAAAG
CTGAGTATGGATTAATTAGTTTACAAAGTACAAAATGTCTAAGAATGCAGAGGCTTCAATTTTCTTCCGTCCATCACTGCTACTCCTTCGGATTC
AGCATTTTTTCCCCTTTCTGATTGAACCATTTATAAAATAATACTCGTCCTTTAACAATTGGACAATCTTTGGTTCAACCAGTCGATTATTTCCT
GCATGATTTCTTCTCTTTCAAGTTCAAAGAGCAGGTCATGTAGCAACCCTTTATACAGCTTGATACTTTTATCAGTTGAAGAAGCCTCTTCGTAG
AGCTTCTTAGAGCCTTCAGGGTCGGTGACTGCATCATCGGAGCCATGAAGGACTAGGAATGGTACTGTCAACTTGCACAGATTCTGTTGCAAGTA
GGAAGTTATCCGAAGGATCTCGTAACCTGTTCGTACCCTAATGGATCCAGTGAATACTAGTGGGTCAGAGTACTTGGCGAGTAATGCTGCAGGAT
CCCTAGACACTGCAGCACCCCTTTTGTTTGCTGCACTGAACTGGTATCTTGGGAATAAAAATGAGAAAATTGGAGCAAGTACTGTGAAAATCGGA
TGAGCTGGTTGAACTCCAACGGCAGGTGAAGTCAATACAACACCATCAATCCTAGATTCTACCTTTTGATCAATTGCTGCCTTGAGGATTATAGC
TGCACCAGTAGAATGTCCAAAGCAAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547820] | SGN-U575438 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348695 [Download][View] | Facility Assigned ID: TUS71O10_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
