EST details — SGN-E547821
| Search information |
| Request: 547821 | Match: SGN-E547821 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194852 | Clone name: TUS-71-O10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C106197 [cLPP-20-E14] | Trace: SGN-T177411 | EST: SGN-E364283 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194852 [TUS-71-O10] | Trace: SGN-T348695 | EST: SGN-E547820 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547821 | Length: 784 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547821 [] (trimmed)
GGCAATCCTGGACACCTGTTTCCTTCAAAGTCAGGGGATTGGTTTTCTTGTTGCACGGCCTCAATGAACACAGTGGCCGATACAATGATTTTGCC
AAGAAGCTAAATGCAAATGGCTTCAAAGTTTATGGAATGGATTGGATTGGACATGGTGGAAGTGATGGACTGCATGCATATGTCCCTTCTCTTGA
TGATGCTGTCAATGACATGAAACAATTTCTGTCAAAGATTTTAGCTGAAAATCCTGGACTTCCGTGCTTTTGCTTTGGACATTCTACTGGTGCAG
CTATAATCCTCAAGGCAGCAATTGATCCAAAGGTAGAATCTAGGATTGATGGTGTTGTATTGACTTCACCTGCCGTTGGAGTTCAACCAGCTCAT
CCGATTTTCACAGTACTTGCTCCAATTTTCTCATTTTTATTCCCAAGATACCAGTTCAGTGCAGCAAACAAAAGGGGTGCTGCAGTGTCTAGGGA
TCCTGCAGCATTACTCGCCAAGTACTCTGACCCACTAGTATTCACTGGATCCATTAGGGTACGAACAGGTTACGAGATCCTTCGGATAACTTCCT
ACTTGCAACAGAATCTGTGCAAGTTGACAGTACCATTCCTAGTCCTTCATGGCTCCGATGATGCAGTCACCGACCCTGAAGGCTCTAAGAAGCTC
TACGAAGAGGCTTCTTCAACTGATAAAAGTATCAAGCTGTATAAAGGGTTGCTACATGACCTGCTCTTTNGACTTGAAAGAGAAGAAATCATGCA
GGAAATAATCGACTGGTTGACCAA
AAGAAGCTAAATGCAAATGGCTTCAAAGTTTATGGAATGGATTGGATTGGACATGGTGGAAGTGATGGACTGCATGCATATGTCCCTTCTCTTGA
TGATGCTGTCAATGACATGAAACAATTTCTGTCAAAGATTTTAGCTGAAAATCCTGGACTTCCGTGCTTTTGCTTTGGACATTCTACTGGTGCAG
CTATAATCCTCAAGGCAGCAATTGATCCAAAGGTAGAATCTAGGATTGATGGTGTTGTATTGACTTCACCTGCCGTTGGAGTTCAACCAGCTCAT
CCGATTTTCACAGTACTTGCTCCAATTTTCTCATTTTTATTCCCAAGATACCAGTTCAGTGCAGCAAACAAAAGGGGTGCTGCAGTGTCTAGGGA
TCCTGCAGCATTACTCGCCAAGTACTCTGACCCACTAGTATTCACTGGATCCATTAGGGTACGAACAGGTTACGAGATCCTTCGGATAACTTCCT
ACTTGCAACAGAATCTGTGCAAGTTGACAGTACCATTCCTAGTCCTTCATGGCTCCGATGATGCAGTCACCGACCCTGAAGGCTCTAAGAAGCTC
TACGAAGAGGCTTCTTCAACTGATAAAAGTATCAAGCTGTATAAAGGGTTGCTACATGACCTGCTCTTTNGACTTGAAAGAGAAGAAATCATGCA
GGAAATAATCGACTGGTTGACCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547821] | SGN-U575438 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348696 [Download][View] | Facility Assigned ID: TUS71O10_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0098 | Quality Trim Threshold: 14.5 |
Working
