EST details — SGN-E548241

Search information 
Request: 548241Match: SGN-E548241
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190048Clone name: TUS-59-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72019 [cLER-19-O2] Trace: SGN-T96433 EST: SGN-E284861 Direction: 5' Facility: TIGR
Clone: SGN-C190048 [TUS-59-G6] Trace: SGN-T340440 EST: SGN-E539565 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548241Length: 478 bp (857 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548241 [] (trimmed) CAACAGATCCAGTAATATTTTTTTTATATATAAAAGTTATTTATAATTATGACTTACTAATTGACCACACACACAATACACATATAGCAATACAA
TGAAACAATTCATACATAACACACGCGAAAAATTGAGAAAAGAAATAATGAAACAGAGGTCGTTATGTTCCCCTCTTAAGCATTTGTTCATAGTT
TTCTATGGACTCAAGCCTCTGAAGAAGCAGCTGTTGTTTAAACTTCTTTATGAAATTCTCTGCGCTTTCATTAATGTCTTCCGATGGCTTGCTCT
CAAGCTTCTTTGGCGCTGCCGCCGGCTTCCTCATATTCGTAGAATTAGGCCTCTGTATCTCTCTGCTGAAATACTCCATCGGCCTTTCTGTTTTT
TTCTCAATTTGTTCAACTTTTGCTGTGCGGTAGTAACGGGGATTCAAGGAACCACTCATTTTTTAAACCTTAATTTTTTGCTCTGTTCTGAAAGA
AAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548241] SGN-U566050 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349116 [Download][View] Facility Assigned ID: TUS59G06_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0001 Quality Trim Threshold: 12.5