EST details — SGN-E548495

Search information 
Request: 548495Match: SGN-E548495
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190948Clone name: TUS-61-L18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81968 [cLET-19-D20] Trace: SGN-T107353 EST: SGN-E296403 Direction: 5' Facility: TIGR
Clone: SGN-C190948 [TUS-61-L18] Trace: SGN-T341986 EST: SGN-E541111 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548495Length: 471 bp (927 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548495 [] (trimmed) GATAGCTCAAACCCCCTTTTCAAGAAAATGTTTCCAAGATCCCCTCAAAGGCTTAAATGCAGGATAATTCCAACATTCACAAGGACCAAAAGTTC
ATCATTCCAAGTTTTTCAAAAAAAAATTTTATACCAAGTTTCTTGGGTGATACAAATCCCACCCCATACATACAGTTTATAAAGGGCTCAAAAAT
GGCCCATTTTGAAAAGAAATGGAAATTCCAAAGGGAGATCCCTTCCCGCCAAAAAAGGAACCCCTAAAATCCTAAAATTTCCGGAAAAATCCAAA
TTTGGGAAAAAACAATTTACTCTCAAGTATGTCAGCTTTTGCCCCCCTGGGTTTCTTGTTGACCTCCGCATTTAAACCCCCAATGGAGACCAACT
CCCCATAGGCACCGGGCTTTTCTGTACCCCCCAAAACCATGGGAACAAATTCCTTCAACACAAACATAAAAAAAACTTCTGGTTTGCCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548495] SGN-U592376 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349370 [Download][View] Facility Assigned ID: TUS61L18_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.883 Expected Error Rate: 0.0287 Quality Trim Threshold: 12.5