EST details — SGN-E548687
| Search information |
| Request: 548687 | Match: SGN-E548687 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191628 | Clone name: TUS-63-I2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89434 [cLEW-17-E10] | Trace: SGN-T113257 | EST: SGN-E300209 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191628 [TUS-63-I2] | Trace: SGN-T343154 | EST: SGN-E542279 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548687 | Length: 792 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548687 [] (trimmed)
ATGGTTCAAATAGTATTTNTGGTTTTATACCAAAATGAAATTAATTATTAAGGGTACATTATACATATTCACTAAAATACTGGTCTTCTTTCCTA
TTTTTCCTTTTTGGAGTCCAAACATTTTATTTACATTCATCACCTAAAAAGTAAAATGACTTTGGGCAAAAGTTTTTCCGTCTCAAAATATTTAT
CGTCCTTACTAAAAATATTTATTGTGATAGGCGAATCTTAAAACTTAGGTTTGTGGTAGGAGCTTGGACCCAAACTGCATACCCATTTAATAACC
AAGACTTCTTTGTGGGGTTATTGAAGATTGCAATCACATTTCATCACTCGAGTTCTATATATCAAATCAATAAATGCATAATACACGTCTTCTAC
ATACACTTACCTCACGTCAATATCGCACTCAACCATGGTTGAGTTCGTATAGTTAAAGACCGGGTACGTAAATGATGCACTCTGAGAGCAACAAG
AAACATGTAAAGCACATCCAGAGAGAAACCTAAAATTGTCCCACAAAGGCAAAGTGCTGCTCTTGCAGAGTACTCATCAGCAAACTCCACGAAAG
CAAAACGAAGACGAGAATGTGGATCACCACAAATTCGGCAGTCAACAACTTGTCCATAAGCACTAAACAAAGCAGCAAGTTGCTCCTCAGTGACA
TTGCTATCTATCTCAGAAACATATACTGTTCGCCTGATGCTATCTTCTCTTTGAGCCTTATAAGCTCTATTGTTCATCCTCCTTTTCCCCTGGTT
AAAGTTGCTGCCTCTCCTTCTGTTGTTTTGAA
TTTTTCCTTTTTGGAGTCCAAACATTTTATTTACATTCATCACCTAAAAAGTAAAATGACTTTGGGCAAAAGTTTTTCCGTCTCAAAATATTTAT
CGTCCTTACTAAAAATATTTATTGTGATAGGCGAATCTTAAAACTTAGGTTTGTGGTAGGAGCTTGGACCCAAACTGCATACCCATTTAATAACC
AAGACTTCTTTGTGGGGTTATTGAAGATTGCAATCACATTTCATCACTCGAGTTCTATATATCAAATCAATAAATGCATAATACACGTCTTCTAC
ATACACTTACCTCACGTCAATATCGCACTCAACCATGGTTGAGTTCGTATAGTTAAAGACCGGGTACGTAAATGATGCACTCTGAGAGCAACAAG
AAACATGTAAAGCACATCCAGAGAGAAACCTAAAATTGTCCCACAAAGGCAAAGTGCTGCTCTTGCAGAGTACTCATCAGCAAACTCCACGAAAG
CAAAACGAAGACGAGAATGTGGATCACCACAAATTCGGCAGTCAACAACTTGTCCATAAGCACTAAACAAAGCAGCAAGTTGCTCCTCAGTGACA
TTGCTATCTATCTCAGAAACATATACTGTTCGCCTGATGCTATCTTCTCTTTGAGCCTTATAAGCTCTATTGTTCATCCTCCTTTTCCCCTGGTT
AAAGTTGCTGCCTCTCCTTCTGTTGTTTTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548687] | SGN-U593155 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349562 [Download][View] | Facility Assigned ID: TUS63I02_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
