EST details — SGN-E548909
| Search information |
| Request: 548909 | Match: SGN-E548909 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192410 | Clone name: TUS-65-I16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92552 [cLEX-11-K9] | Trace: SGN-T117023 | EST: SGN-E304667 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E548909 | Length: 724 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E548909 [] (trimmed)
GTAAAAGAAAATGGTTGAAGAAGAAATGAGAAAAGGTCCATGGACAGAACAAGAAGATGTTCAACTAGTATTTTATGTGAAGATGTTTGGTGATC
GTCGCTGGGATTTTCTGGCGAAAGTTTCAGGTTTGAAGGTTGGTATAGGCGGGAGAGAATATAGGCTTAGTTTTGAAAGGGAGACACTTTAATAA
CCCCTTCTTCTTCTGCATTCCATTTCTTGTGATTCATTTATTTATAGGTTTGAAACGAAGTGGAAAGAGTTGCAGATTACGATGGGTTAATTACT
TGAATCCTTCTCTAAAACGTGGAAAGATGACTCCTCAAGAAGAACTTCTTGTTCTTCAACTTCACTCCAAATATGGAAATAGATGGTCAAAAATA
GCTGGAAAATTACCAGGGCGAACTGATAATGAAATCAAGAATTACTGGAGAACACATATGAGGAAACAAGCTCAAGATGAGAAGAAGAATACTAA
TAAGGCTTCAATATCTCCATCTTCATCCAATTGTTCCTCTTCCTCTGCCAATAGTCCTGTTGAGGACTTCCGTACTGAAAGAAATGAGTTGTTGC
AAGTTGCTGGAGAAAATAAAATATATGAAGGGGATCAAAACATGATTGTCTATTCCATGGATGAAATATGGAAAGAAGTCGAATCAACCGAAGAA
ATCGAAACTAAGAATGATTACCAGCTATGGCATCAATACTTGGGATTATATTATTGCCC
GTCGCTGGGATTTTCTGGCGAAAGTTTCAGGTTTGAAGGTTGGTATAGGCGGGAGAGAATATAGGCTTAGTTTTGAAAGGGAGACACTTTAATAA
CCCCTTCTTCTTCTGCATTCCATTTCTTGTGATTCATTTATTTATAGGTTTGAAACGAAGTGGAAAGAGTTGCAGATTACGATGGGTTAATTACT
TGAATCCTTCTCTAAAACGTGGAAAGATGACTCCTCAAGAAGAACTTCTTGTTCTTCAACTTCACTCCAAATATGGAAATAGATGGTCAAAAATA
GCTGGAAAATTACCAGGGCGAACTGATAATGAAATCAAGAATTACTGGAGAACACATATGAGGAAACAAGCTCAAGATGAGAAGAAGAATACTAA
TAAGGCTTCAATATCTCCATCTTCATCCAATTGTTCCTCTTCCTCTGCCAATAGTCCTGTTGAGGACTTCCGTACTGAAAGAAATGAGTTGTTGC
AAGTTGCTGGAGAAAATAAAATATATGAAGGGGATCAAAACATGATTGTCTATTCCATGGATGAAATATGGAAAGAAGTCGAATCAACCGAAGAA
ATCGAAACTAAGAATGATTACCAGCTATGGCATCAATACTTGGGATTATATTATTGCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548909] | SGN-U586334 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349784 [Download][View] | Facility Assigned ID: TUS65I16_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 14.5 |
Working
