EST details — SGN-E550057
| Search information |
| Request: 550057 | Match: SGN-E550057 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169433 | Clone name: TUS-5-L7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C19144 [cLED-25-M16] | Trace: SGN-T55016 | EST: SGN-E240225 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169433 [TUS-5-L7] | Trace: SGN-T351235 | EST: SGN-E550360 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550057 | Length: 724 bp (803 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E550057 [] (trimmed)
AGATGCATACACGTACTTCTGGGTTTACGCATTCTTGTGAAAAAAGGACGACGAATGTGTGCCCCTTGCATGTATTCTTGTAGATATCACAGTTG
CAGATGAGTTCCTCCTCTTAAGAATTCAAAATCGGTTGTTCTTTTATTATGCAATCTCAAGGCACTCTTTTGGAACTATATCTCGTGTACAGACA
TACATTACAATATACCTTCACGTTTCAAGTATAATAATATACCATATTAATTTCACGGAATTCAAAGTACCTTTTAGTTTATTTGGTTGTTATGT
TGAGAGATATCTCGTCTTGCGAGGGTCAATCTGAAAGTCTGTTCCTCACAAAGGTTGGGGTAAGGTTTGTGTACATCTTACTCTCCCTAGTCTCC
ACTTGTGAGATTACACGGGGGATGTTGTTGTTGAGATATCTTGTCACTGTTTCAGTGATGCGCTATTTATTTTCGTCAATCTTTACATGTACAGG
TCACTATACTGTGTTATTTGTGAATTATTAGTCTTGATAATCTTTCCATAGATACATATTGCTATAATCTGCTGGCTAGCATGTTAGGAGAGTTT
GACCCGAAACTCGATTTAAGATCTAAGATTGTTAAATTCTACCCTGACTATATGTGGATGTCCCTGGGGTAAGAGTAATTTTAGCAATGAATGCG
GGCATCATATTGTTTGGACTCTTCAAAAATGTTTGTCAGATCTTNCAACACACACTCGT
CAGATGAGTTCCTCCTCTTAAGAATTCAAAATCGGTTGTTCTTTTATTATGCAATCTCAAGGCACTCTTTTGGAACTATATCTCGTGTACAGACA
TACATTACAATATACCTTCACGTTTCAAGTATAATAATATACCATATTAATTTCACGGAATTCAAAGTACCTTTTAGTTTATTTGGTTGTTATGT
TGAGAGATATCTCGTCTTGCGAGGGTCAATCTGAAAGTCTGTTCCTCACAAAGGTTGGGGTAAGGTTTGTGTACATCTTACTCTCCCTAGTCTCC
ACTTGTGAGATTACACGGGGGATGTTGTTGTTGAGATATCTTGTCACTGTTTCAGTGATGCGCTATTTATTTTCGTCAATCTTTACATGTACAGG
TCACTATACTGTGTTATTTGTGAATTATTAGTCTTGATAATCTTTCCATAGATACATATTGCTATAATCTGCTGGCTAGCATGTTAGGAGAGTTT
GACCCGAAACTCGATTTAAGATCTAAGATTGTTAAATTCTACCCTGACTATATGTGGATGTCCCTGGGGTAAGAGTAATTTTAGCAATGAATGCG
GGCATCATATTGTTTGGACTCTTCAAAAATGTTTGTCAGATCTTNCAACACACACTCGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550057] | SGN-U572560 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350932 [Download][View] | Facility Assigned ID: AGT-279_E10_TUS5#3-D7.T3_072 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
