EST details — SGN-E550565
| Search information |
| Request: 550565 | Match: SGN-E550565 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169722 | Clone name: TUS-6-H8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C26859 [cLEF-41-M24] | Trace: SGN-T60439 | EST: SGN-E247024 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169722 [TUS-6-H8] | Trace: SGN-T350666 | EST: SGN-E549791 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550565 | Length: 673 bp (775 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E550565 [] (trimmed)
CCAATATCCTCCAACATCCATTTACCAAAAAACAAAGAACCAACAAGCAAAGAAACAGGGTAAAGAAAAATCAAATCAAAGTGTTAATCAGAAAG
TCCATTTCCAGATCTTGATTCGAAGATCCACTTTGCATTTCACATTTGAAGTAGTAGCTTTAGTCGGAGTTTTGCCGGAAGGAACAGTAATTTTA
ATACCACTGCATTTAACTCGAATTCCGACTTTCTTCGTTTTCAAGCTTCCAACTTTGACTTTAACTTTTGTATCAAGCTTTATCTCCAATGGCAG
ACTCTTCTTATTCTTCAATTTAGATTTCAGATTAGAAATCGCAGAATCGTCCAGGTTTTTTCCTGAACTTGACACTACTGTCTTCAACGTCGTTG
TGTTTTTCCTATTATGCGTAAAAGCCGGTAACGATCCGTCTCCGATATCAACATCGGCGGAATTGAACGAAATGTTAATAGGATCGTAGAAGAAA
GAGATCTTTTTGTTTGGATTACGAGCAACAACGGTGAGACTGAATTTCGACGCGAGTTTCGTAGAAGTAAGATTTAATTGAGAGACTTGAAGAGT
AGAAACAGAGAAGGAAGGCCTCTGAGGACGGTTAAGTACCCAGATAATCGCACCGGCAATTGCAGCAAGTAGAACAATAGTGATTATGAATAAGG
TAATACAC
TCCATTTCCAGATCTTGATTCGAAGATCCACTTTGCATTTCACATTTGAAGTAGTAGCTTTAGTCGGAGTTTTGCCGGAAGGAACAGTAATTTTA
ATACCACTGCATTTAACTCGAATTCCGACTTTCTTCGTTTTCAAGCTTCCAACTTTGACTTTAACTTTTGTATCAAGCTTTATCTCCAATGGCAG
ACTCTTCTTATTCTTCAATTTAGATTTCAGATTAGAAATCGCAGAATCGTCCAGGTTTTTTCCTGAACTTGACACTACTGTCTTCAACGTCGTTG
TGTTTTTCCTATTATGCGTAAAAGCCGGTAACGATCCGTCTCCGATATCAACATCGGCGGAATTGAACGAAATGTTAATAGGATCGTAGAAGAAA
GAGATCTTTTTGTTTGGATTACGAGCAACAACGGTGAGACTGAATTTCGACGCGAGTTTCGTAGAAGTAAGATTTAATTGAGAGACTTGAAGAGT
AGAAACAGAGAAGGAAGGCCTCTGAGGACGGTTAAGTACCCAGATAATCGCACCGGCAATTGCAGCAAGTAGAACAATAGTGATTATGAATAAGG
TAATACAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550565] | SGN-U566344 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351440 [Download][View] | Facility Assigned ID: AGT-287_E03_TUS6#1-H8.Td_021 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |
Working
