EST details — SGN-E550616
| Search information |
| Request: 550616 | Match: SGN-E550616 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C171668 | Clone name: TUS-11-I10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C61827 [cLEM-19-J19] | Trace: SGN-T86286 | EST: SGN-E272288 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E550616 | Length: 680 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E550616 [] (trimmed)
TGGGGGTCTTTTTACACGCTTGAAACCCCCTCAAAAAACATAATCGGGGTTTGTTAACTCCAGAATTACCTATGATGCACTATCCAATAGCAGAC
AAGCTGTTATGAAGAGTTGCAATGACTCGGGTGGAGATGGCCTACGAAAAGAGAATCACTCGGCTGAAAGTTGTACTAAGGATAACCCATCTCCA
CAGAAGCAAGTGATAAAGACTTCGTTAGTAAGGCCTCCAGTTAAGCCTGAATCAATCAGCAAAATAGCAGATGTTAGGGTCCAGTGCAGGGCTGC
AGAACAGGCACAAGAGAGCTATTTAGCTTCTTTAGATGAACGAGAATCGGAAGCTGAGGGCACAGAAAACAAAATCTCTGAAGACATTTTGAAGT
GCTTGTCTAGCATCTTATTAAGGTTGAGCACATCTAAAGGGAAGATAACAAATCCAGAATCTTTTCGCTCTTTAGGAGCAAAAGTGTTAAATGAA
AGCAATGAGGAAAGGGAGTTGCAAGATCCGTATTGCATTTGCTCGGAACTAAGGAAGCAAGATATTGGCGAATACAGATATATACTGAACATTGA
TGCTAACTCTGTTAATCCTAACCGGAAAATGAATGCTTCGTTTCTGAACACAGACTTAAGATTCTCCTTGACAAGCTATCATCTGTGAAATTAGA
GGGTTTGACTCCTCA
AAGCTGTTATGAAGAGTTGCAATGACTCGGGTGGAGATGGCCTACGAAAAGAGAATCACTCGGCTGAAAGTTGTACTAAGGATAACCCATCTCCA
CAGAAGCAAGTGATAAAGACTTCGTTAGTAAGGCCTCCAGTTAAGCCTGAATCAATCAGCAAAATAGCAGATGTTAGGGTCCAGTGCAGGGCTGC
AGAACAGGCACAAGAGAGCTATTTAGCTTCTTTAGATGAACGAGAATCGGAAGCTGAGGGCACAGAAAACAAAATCTCTGAAGACATTTTGAAGT
GCTTGTCTAGCATCTTATTAAGGTTGAGCACATCTAAAGGGAAGATAACAAATCCAGAATCTTTTCGCTCTTTAGGAGCAAAAGTGTTAAATGAA
AGCAATGAGGAAAGGGAGTTGCAAGATCCGTATTGCATTTGCTCGGAACTAAGGAAGCAAGATATTGGCGAATACAGATATATACTGAACATTGA
TGCTAACTCTGTTAATCCTAACCGGAAAATGAATGCTTCGTTTCTGAACACAGACTTAAGATTCTCCTTGACAAGCTATCATCTGTGAAATTAGA
GGGTTTGACTCCTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550616] | SGN-U583858 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351491 [Download][View] | Facility Assigned ID: TUS11I10_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0139 | Quality Trim Threshold: 20.5 |
Working
