EST details — SGN-E550682
| Search information |
| Request: 550682 | Match: SGN-E550682 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C186447 | Clone name: TUS-50-A5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C3213 [cLEC-1-I1] | Trace: SGN-T24606 | EST: SGN-E200393 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C3213 [cLEC-1-I1] | Trace: SGN-T24607 | EST: SGN-E200394 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E550682 | Length: 644 bp (772 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E550682 [] (trimmed)
ATATACTGCATTTTCTTGGGAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCAAAGGGTACCAATGAGGCCATGCTTGTGAG
TGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGATCTATGATC
ATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCATCTGATGGATCTGTCATGATCTCTGAT
AATGTGGATCATATCAAAGGAAGCTGTCTCAAATCATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGATTGAAGAGCTTTGA
GCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAAGGAGCCATGTGTGGAGCTTGCTTCAAAGTTGATGTCTACTCCAAGGTGA
ATAGCATGCCAAGAGTTGGAAGTTCTGCCAACTGGGCTAATTGGGGCCAGCAGGCTTAGGTTCATTTGGACCTCACTTTAACTAACTACAATATA
AAGAAGAAAAGAAAAAAGTACTTTATCTTTGTCTTCATTCCTGTTGTTATTTTCTGTTTCCCTATTGTATTTCA
TGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGATCTATGATC
ATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCATCTGATGGATCTGTCATGATCTCTGAT
AATGTGGATCATATCAAAGGAAGCTGTCTCAAATCATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGATTGAAGAGCTTTGA
GCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAAGGAGCCATGTGTGGAGCTTGCTTCAAAGTTGATGTCTACTCCAAGGTGA
ATAGCATGCCAAGAGTTGGAAGTTCTGCCAACTGGGCTAATTGGGGCCAGCAGGCTTAGGTTCATTTGGACCTCACTTTAACTAACTACAATATA
AAGAAGAAAAGAAAAAAGTACTTTATCTTTGTCTTCATTCCTGTTGTTATTTTCTGTTTCCCTATTGTATTTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550682] | SGN-U564627 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351557 [Download][View] | Facility Assigned ID: TUS50A5_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |
Working
