EST details — SGN-E550979

Search information 
Request: 550979Match: SGN-E550979
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C188230Clone name: TUS-54-K12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C36697 [cLEG-39-L23] Trace: SGN-T71557 EST: SGN-E257871 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E550979Length: 510 bp (668 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E550979 [] (trimmed) GTTGGGGGTCAGGACTAGATTCGACCTCTATGGAGGCATTATTTCCAGAACACTCAAGGCCTCATCTTTGTGGTTGACAGCAATGACTGAGACCG
TGTTGTTGAGGCAAGGGACGAGCTTCATAGGATGTTGAATGAGGATGAACTAAGAGAGGCTGTGCTGCTTGTTTTTGCAAACAAACAAGATCTTC
CAAACGCAATGAATGCAGCTGAAATCACCGACAAACTTGGACTTCATTCTCTTCGACAGAGGCACTGGTATATCCAGAGTACATGTGCCACTTCT
GGAGAAGGGTTATACGAGGGACTTGATTGGCTATCGAACAATATTTCAAACAAGGCTTAGAGCATCAATTAGATTCTGCCCTCGCTTGTCGCTCG
CTTACCTATATCTGGAGTATAGATGTTAAACACCGTTTGGTTATTTTGGATAGAAAGAAGATCAATTTCTGAAAAATATCCTGCATTTCTTTCCC
TTTTCATGCTTTGGTTAGTTGCTACTTTGCTTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550979] SGN-U580474 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351854 [Download][View] Facility Assigned ID: TUS54K12_T3
Submitter: Koni Sequencing Facility: Giovanni
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0102 Quality Trim Threshold: 20.5