EST details — SGN-C61987
| Search information |
| Request: 61987 | Match: SGN-C61987 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C61987 | Clone name: cLEM-1-B3 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177720 is on microarray TOM1: SGN-S1-1-3.1.6.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177720 [TUS-27-E14] | Trace: SGN-T183003 | EST: SGN-E370628 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177720 [TUS-27-E14] | Trace: SGN-T183004 | EST: SGN-E370629 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270216 | Length: 589 bp (837 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270216 [] (trimmed)
CCCCCGGCCTGCAGGATTTCGGCCCGAGGGACAAATCGGAATTGAGCAATTATCGGACAAGCGGAGCTGGCAATTCCAGCGAGAGCGACTGGAAC
TATTCCGCCTCGAAAATTTTTGCCGGAAATTGGGTGTAATCGGCCGGCTTCCCTGCATGTGTACAGATGAAAGTCGCTAAGAGCAACTACTTCTT
TTCACATTTTTGCTTTCATTTCCTTTTCACGATCATTCTGCTGGCATTGAATCCAGTTCTGAGCATCCGATTCCCAGATCGGATCCAGGAGGTTC
CACAGGATGCCTCTAATCAGCCATTACAAACTGCAGTTTTTGCTCTCGGAAGCTTCTGGAGATCGGAAGCGTCATTTGGCTGCTTAAACGGCATC
GTAAGAACCACCGTCGGTTATTCTGGTGGTTCAAAAGCCAATCCTGAGTACAGAAATTTGGGCGACCACGCTGAATCTGTACAGGTCGAGTATGA
CCCCCGAGTACTTGGTTTCAGACAACTATTGGAGGTCTTCTGGTCTAGCCATGATTCCAGGCAAGTCTTTGGGCAAGGTCCTGATGTGGGTAACC
AGTACAGGTCTATTATTTT
TATTCCGCCTCGAAAATTTTTGCCGGAAATTGGGTGTAATCGGCCGGCTTCCCTGCATGTGTACAGATGAAAGTCGCTAAGAGCAACTACTTCTT
TTCACATTTTTGCTTTCATTTCCTTTTCACGATCATTCTGCTGGCATTGAATCCAGTTCTGAGCATCCGATTCCCAGATCGGATCCAGGAGGTTC
CACAGGATGCCTCTAATCAGCCATTACAAACTGCAGTTTTTGCTCTCGGAAGCTTCTGGAGATCGGAAGCGTCATTTGGCTGCTTAAACGGCATC
GTAAGAACCACCGTCGGTTATTCTGGTGGTTCAAAAGCCAATCCTGAGTACAGAAATTTGGGCGACCACGCTGAATCTGTACAGGTCGAGTATGA
CCCCCGAGTACTTGGTTTCAGACAACTATTGGAGGTCTTCTGGTCTAGCCATGATTCCAGGCAAGTCTTTGGGCAAGGTCCTGATGTGGGTAACC
AGTACAGGTCTATTATTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270216] | SGN-U576565 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83589 [Download][View] | Facility Assigned ID: TGFAC02TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |
Working
