EST details — SGN-C62040
Search information |
Request: 62040 | Match: SGN-C62040 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C62040 | Clone name: cLEM-1-E23 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177740 is on microarray TOM1: SGN-S1-1-7.2.6.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E270410 | Length: 573 bp (1198 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E270410 [] (trimmed)
GAGGCCCTTTTGTTCTTCTCCATCTTCTTAGCCTCCCTCTTAAAAATTCTTGAAAATTCTTTCAGCCCAATTAAGTAAAAGGCAAAAAGGTGCAA
ATTTTCATTATTATTTTTTATATAACCGTGTTTTTTTTTTTTTTTTTATATCATATCATACACCTATAAAAGCTTGGACTTAGGAGTCTTTGTTT
CAAACTTGACAATAACAAAAAAAAAATCAGATTTTTTTCTTGATTTTTGGAATTCTTTTTCACCAAAACTCAAATCTTGTTATATAAAATTAAGG
GTTAGTTTCTTTTTTAATTGTTTTATAGTACAATATGTCGAAGAGTATACTTGTGACAGGGGGAGCAGGGTATATTGGGAGTCACACAGTGTTGC
AATTGTTGCTTGGTGGTTATAAGACTGTGGTGATTGATAATTTGGATAATTCTTCTGAAATTGCTGTGAAAAGGGTTAAGGAAATTGCTGGTGAA
TATGGCTCTAATCTCTCTTTTCACAAGGTTGATCTACGTGATAAGCCGGCAATTGAGGAGATTTTCAGGTCTAACAAATTTGATGCTGTTATTCA
TTT
ATTTTCATTATTATTTTTTATATAACCGTGTTTTTTTTTTTTTTTTTATATCATATCATACACCTATAAAAGCTTGGACTTAGGAGTCTTTGTTT
CAAACTTGACAATAACAAAAAAAAAATCAGATTTTTTTCTTGATTTTTGGAATTCTTTTTCACCAAAACTCAAATCTTGTTATATAAAATTAAGG
GTTAGTTTCTTTTTTAATTGTTTTATAGTACAATATGTCGAAGAGTATACTTGTGACAGGGGGAGCAGGGTATATTGGGAGTCACACAGTGTTGC
AATTGTTGCTTGGTGGTTATAAGACTGTGGTGATTGATAATTTGGATAATTCTTCTGAAATTGCTGTGAAAAGGGTTAAGGAAATTGCTGGTGAA
TATGGCTCTAATCTCTCTTTTCACAAGGTTGATCTACGTGATAAGCCGGCAATTGAGGAGATTTTCAGGTCTAACAAATTTGATGCTGTTATTCA
TTT
Unigenes |
Current Unigene builds | |||||
[SGN-E270410] | SGN-U583215 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T83783 [Download][View] | Facility Assigned ID: TGFAA36TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.923 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 20.5 |