EST details — SGN-C62090

Search information 
Request: 62090Match: SGN-C62090
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C62090Clone name: cLEM-1-H10
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177758 is on microarray TOM1: SGN-S1-1-5.3.6.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177758 [TUS-27-G4] Trace: SGN-T183011 EST: SGN-E370636 Direction: 3' Facility: INRA
Clone: SGN-C177758 [TUS-27-G4] Trace: SGN-T183012 EST: SGN-E370637 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E270392Length: 469 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E270392 [] (trimmed) GGTTGAAAATAGGCTTGTTGGAATGAAGAGCCGTGGAGTATATGAAACCCCTGGGGGAACTATCCTTTTCTCAGCTGTGCAAGAACTTGAGTCTC
TTACACTGGATCGTGAAACAATCCAAGTCAAGGATTCTCTCGCCCTCAAATATGCAGAATTAGTTTATGCTGGCAGGTGGTTTGATCCACTTAGC
GAGTCAATGGATGCTTTCATGGAGAATATTACCAAAACTACAACAGGTTCAGTTACTCTCAAACTATACAAAGGATCAGTTTCATTGACAGGTCG
TCAAAGTCCTCACAGTTTGTACAGACAAGATATCTCATCATTCGAGAGTGGGGATATCTACAATCAAGCCGATGCTGCACGATTCATTCGTCTGT
ATGGGCTTCCAATGAGGGTTAGGGCAATGCTTGAGAACGGTCTGTAAAATCGTTTTCGCGTCGTGAATTGATGGTTTAACGTTGACAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E270392] SGN-U571375 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T83765 [Download][View] Facility Assigned ID: TGFAD41TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0223 Quality Trim Threshold: 14.5