EST details — SGN-C62179
| Search information |
| Request: 62179 | Match: SGN-C62179 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C62179 | Clone name: cLEM-1-L20 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177788 is on microarray TOM1: SGN-S1-1-7.4.6.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177788 [TUS-27-H10] | Trace: SGN-T193022 | EST: SGN-E391696 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177788 [TUS-27-H10] | Trace: SGN-T193271 | EST: SGN-E391945 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270319 | Length: 499 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270319 [] (trimmed)
GGTTTTCAAGACTCTGCCTTTTTCCCCCTTCTCTGCTTAGCCTTTTCCACCTATTTTTTGCTATTCAGATCTCAAGTTTTACACTTTGCTTTCCC
TCTGTAAATTTCTTGTTTTGTGGCAAAATTCAGAAAGTAGCAAAGTTTTCTTGAAATGGCCGGCCGTTATGATCATAACCCTTTTGAAGAAGAAG
AAGAAGTTAACCCTTTTGCTGATGGCGGAGGCAGAGGGAAATCTTCAGGGCAATCAAAATTTAGTGGAGGTGCATTTTATACCACATCCGGGAGT
GTGCCTCCAGCAACAAACTCCAGACTTTCACCCCTTCCGCCAGAACCAGCTGATTTCTATGACCGCAATGCGTCAATTGATATTCCTCTTGACAG
TGCTTCGGACCTGAAAAAGAAAGAAAAAGAATTACAGTCTAAGGAGAATGAATTGCGGAGGAGGGGAACAGGATCTAAAAAGGAGAGAAGATGCT
GCTGCACGAGCCGGCATTGTTCTC
TCTGTAAATTTCTTGTTTTGTGGCAAAATTCAGAAAGTAGCAAAGTTTTCTTGAAATGGCCGGCCGTTATGATCATAACCCTTTTGAAGAAGAAG
AAGAAGTTAACCCTTTTGCTGATGGCGGAGGCAGAGGGAAATCTTCAGGGCAATCAAAATTTAGTGGAGGTGCATTTTATACCACATCCGGGAGT
GTGCCTCCAGCAACAAACTCCAGACTTTCACCCCTTCCGCCAGAACCAGCTGATTTCTATGACCGCAATGCGTCAATTGATATTCCTCTTGACAG
TGCTTCGGACCTGAAAAAGAAAGAAAAAGAATTACAGTCTAAGGAGAATGAATTGCGGAGGAGGGGAACAGGATCTAAAAAGGAGAGAAGATGCT
GCTGCACGAGCCGGCATTGTTCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270319] | SGN-U577940 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83692 [Download][View] | Facility Assigned ID: TGFAD70TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0096 | Quality Trim Threshold: 14.5 |
Working
