EST details — SGN-C62337
| Search information |
| Request: 62337 | Match: SGN-C62337 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C62337 | Clone name: cLEM-21-E12 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C183298 is on microarray TOM1: SGN-S1-1-1.1.3.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183298 [TUS-41-M24] | Trace: SGN-T199487 | EST: SGN-E398161 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183298 [TUS-41-M24] | Trace: SGN-T199736 | EST: SGN-E398410 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272702 | Length: 526 bp (960 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272702 [] (trimmed)
GCAGAGAATGAAATATTTCACACACTCTCATTTTTAGCAGGAGTTATGGTTTGGTCACAGATCACCGATCTGCCATTTTCGTTGTATTCAACCTT
TGTTATCGAGGCCCGCCATGGGTTCAACAAGCAAACAGTGTGGTTATACTTCAGGGATATGATAAAAGGAATTGCTTTATCTATTGTGATTGGTC
CTCCCATTGTGGCTGCCATTATTGTTATAGTGCAAAAAGGAGGTCCTTACTTGGCAATTTACTTATGGGGATTTATGCTGGTTTTGGCTCTTGTT
ATGATGACTATCTACCCAGTACTAATTGCTCCACTTTTCAACAAGTTCACTCCGCTTCCACAGGGAGAGCTTAGATTGAAGATCGAGAATCTTGC
ATCCTCACTCAAATTTCCCCTAAAGAAATTGTTTGTTGTTGATGGCTCCACAAGGTCAAGCCATAGCAATGCATACATGTACGGATTCTTCAAGA
ACAAGCGCATTGTCCTCTATGATACACTCATCCAGCAGTGCAAGAATGATG
TGTTATCGAGGCCCGCCATGGGTTCAACAAGCAAACAGTGTGGTTATACTTCAGGGATATGATAAAAGGAATTGCTTTATCTATTGTGATTGGTC
CTCCCATTGTGGCTGCCATTATTGTTATAGTGCAAAAAGGAGGTCCTTACTTGGCAATTTACTTATGGGGATTTATGCTGGTTTTGGCTCTTGTT
ATGATGACTATCTACCCAGTACTAATTGCTCCACTTTTCAACAAGTTCACTCCGCTTCCACAGGGAGAGCTTAGATTGAAGATCGAGAATCTTGC
ATCCTCACTCAAATTTCCCCTAAAGAAATTGTTTGTTGTTGATGGCTCCACAAGGTCAAGCCATAGCAATGCATACATGTACGGATTCTTCAAGA
ACAAGCGCATTGTCCTCTATGATACACTCATCCAGCAGTGCAAGAATGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272702] | SGN-U578791 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86700 [Download][View] | Facility Assigned ID: TGFDD30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0094 | Quality Trim Threshold: 14.5 |
Working
