EST details — SGN-C64055
| Search information |
| Request: 64055 | Match: SGN-C64055 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64055 | Clone name: cLEM-4-P6 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180842 is on microarray TOM1: SGN-S1-1-1.3.17.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180842 [TUS-35-G16] | Trace: SGN-T1648 | EST: SGN-E378428 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C180842 [TUS-35-G16] | Trace: SGN-T193870 | EST: SGN-E392544 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180842 [TUS-35-G16] | Trace: SGN-T199191 | EST: SGN-E397865 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268864 | Length: 663 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268864 [] (trimmed)
GATTTAGACAATATGCTGGATATGTGGATGTTGATGAGAAGGCTGGAAGAAGTTTGTTTTATTACTTTGTTGAAGCTGAAAAAGATGCTCATAAT
CTACCTCTAACTCTTTGGTTAAATGGAGGTCCAGGGTGTTCATCAATTGGAGGGGGTGCCTTTACAGAACTAGGACCATTTTTTCCTAGAGGTGA
TGGGCATGGTCTCAGAAGAAATACTAAATCTTGGAATAAAGTATCAAATTTGTTATTTATTGAATCTCCTGTTGGGGTTGGATGGTCTTATTCAA
ACACATCCAGTGATTATACTTCTGGAGATGAATCTACTGCAAAGGATATGCTCAATTTCATGCTTAAATGGTACGAAAAGTTTTCAGAATTAAAA
TCTAGACCCTTGTTCCTAACGGGTGAAAGTTACGCAGGACATTATATACCACAGTTAGCAAATGGCATACTAGACTACAACAAGCAGTCCAAGGA
TTTTAAGTTTAACCTAAAGGGAGTAGCTATTGGAAATCCACTTTTGAGATTAGACAGAGATGTTCCAGCAATGTATGAATATTACTGGTCACATG
GAATGATATCAGATGAGTTATTTTTGATAATCAAAGAGAATTGCGATTTCGATGATTATGAATTCCCACTTCCTCATAATGTATCAATTACAT
CTACCTCTAACTCTTTGGTTAAATGGAGGTCCAGGGTGTTCATCAATTGGAGGGGGTGCCTTTACAGAACTAGGACCATTTTTTCCTAGAGGTGA
TGGGCATGGTCTCAGAAGAAATACTAAATCTTGGAATAAAGTATCAAATTTGTTATTTATTGAATCTCCTGTTGGGGTTGGATGGTCTTATTCAA
ACACATCCAGTGATTATACTTCTGGAGATGAATCTACTGCAAAGGATATGCTCAATTTCATGCTTAAATGGTACGAAAAGTTTTCAGAATTAAAA
TCTAGACCCTTGTTCCTAACGGGTGAAAGTTACGCAGGACATTATATACCACAGTTAGCAAATGGCATACTAGACTACAACAAGCAGTCCAAGGA
TTTTAAGTTTAACCTAAAGGGAGTAGCTATTGGAAATCCACTTTTGAGATTAGACAGAGATGTTCCAGCAATGTATGAATATTACTGGTCACATG
GAATGATATCAGATGAGTTATTTTTGATAATCAAAGAGAATTGCGATTTCGATGATTATGAATTCCCACTTCCTCATAATGTATCAATTACAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268864] | SGN-U570688 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84282 [Download][View] | Facility Assigned ID: TGFAP87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0021 | Quality Trim Threshold: 14.5 |
Working
