EST details — SGN-C64155
Search information |
Request: 64155 | Match: SGN-C64155 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C64155 | Clone name: cLEM-5-E23 |
| ||
Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177864 is on microarray TOM1: SGN-S1-1-3.3.6.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177864 [TUS-27-K14] | Trace: SGN-T182956 | EST: SGN-E370581 | Direction: 3' | Facility: INRA |
Clone: SGN-C177864 [TUS-27-K14] | Trace: SGN-T182957 | EST: SGN-E370582 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E271350 | Length: 430 bp (1014 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271350 [] (trimmed)
GCTTTGGTGGAGGCGGGTTTGGTGGTGGTGGAAGCAGCAGAGGAAGAAGGCAAAGGAGAGGGGAGGATGTTGTCCACCCTCTCAAGGTCTCTTTG
GAGGATCTTTACAATGGAATATCAAAGAAGCTATCACTATCTCGCAATGTGTTGTGCTCAAAGTGCAAGGGGGTAGGGTCTAAATCAGGTGCTTC
ATTGAAATGTCCTGGATGTCAAGGGAAAGGAATGAAAGTTTCAATCAGACAACTTGGCCCCATGATCCAGCAGATGCAGCACCCATGTAATGAGT
GTAGGGGTACTGGTGAGAAAATAAACGATAAAGACAGGTGTCCACAGTGCAAGGGCGAGAAAGTTGTGCAGGAGAAGAAGGTGTTGGAAGTTGTT
GTGGATAAGGGTATGCAAAATGGACAAAAGATAACATTTCCAGGAGAGGC
GAGGATCTTTACAATGGAATATCAAAGAAGCTATCACTATCTCGCAATGTGTTGTGCTCAAAGTGCAAGGGGGTAGGGTCTAAATCAGGTGCTTC
ATTGAAATGTCCTGGATGTCAAGGGAAAGGAATGAAAGTTTCAATCAGACAACTTGGCCCCATGATCCAGCAGATGCAGCACCCATGTAATGAGT
GTAGGGGTACTGGTGAGAAAATAAACGATAAAGACAGGTGTCCACAGTGCAAGGGCGAGAAAGTTGTGCAGGAGAAGAAGGTGTTGGAAGTTGTT
GTGGATAAGGGTATGCAAAATGGACAAAAGATAACATTTCCAGGAGAGGC
Unigenes |
Current Unigene builds | |||||
[SGN-E271350] | SGN-U579998 | Tomato 200607 | Build 2 | 94 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T85155 [Download][View] | Facility Assigned ID: TGFAQ36TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.940 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |