EST details — SGN-C64229
| Search information |
| Request: 64229 | Match: SGN-C64229 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64229 | Clone name: cLEM-5-I16 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177907 is on microarray TOM1: SGN-S1-1-8.1.6.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177907 [TUS-27-M9] | Trace: SGN-T182812 | EST: SGN-E371304 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177907 [TUS-27-M9] | Trace: SGN-T182813 | EST: SGN-E371305 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271404 | Length: 498 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271404 [] (trimmed)
GCCCCCCCCTTTTTTTTTCTCTGTTTGAATTCATCTCTGGTTTCTCTTTTATAGAGAGAAATTTGAATCCCCATTTGCATTGTAATGGCGACCAT
GTCATTCGTTGGAAGACTTCTCTTCGTATCCGTCTTTGTTCTCTCCGCTTATCAAGAGTTCAGTGAATTTGGGTCTGATGGCGGGCCAGCAGCAA
AGGCTTTAGCACCAAAGTTCAATGTTTTGTCAAAGCATGTGGCAACACACATCGGATTTGAATTACCCCATGTAGAGATGAAACATCTTATTTTG
GGGGCCATAGTTTTGAAGGGTCTTGGAAGCCTTTTATTCGTCTTCGGCAGCACTCTTGGAGCTCTTCTTCTGCTGATACATCAGGCCGTTGCTTC
CCCAGTTTTGTACGACTTCTACAACTATGATGTTGACAAGAAGGAATTCGTTCAACTCTTTTTCAAATTTTCTCAGAACTTGGCGTTGCTAGGTG
CACTATTGTTTTTCATTGGCATG
GTCATTCGTTGGAAGACTTCTCTTCGTATCCGTCTTTGTTCTCTCCGCTTATCAAGAGTTCAGTGAATTTGGGTCTGATGGCGGGCCAGCAGCAA
AGGCTTTAGCACCAAAGTTCAATGTTTTGTCAAAGCATGTGGCAACACACATCGGATTTGAATTACCCCATGTAGAGATGAAACATCTTATTTTG
GGGGCCATAGTTTTGAAGGGTCTTGGAAGCCTTTTATTCGTCTTCGGCAGCACTCTTGGAGCTCTTCTTCTGCTGATACATCAGGCCGTTGCTTC
CCCAGTTTTGTACGACTTCTACAACTATGATGTTGACAAGAAGGAATTCGTTCAACTCTTTTTCAAATTTTCTCAGAACTTGGCGTTGCTAGGTG
CACTATTGTTTTTCATTGGCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271404] | SGN-U578722 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85209 [Download][View] | Facility Assigned ID: TGFAR56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |
Working
