EST details — SGN-C64244
| Search information |
| Request: 64244 | Match: SGN-C64244 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64244 | Clone name: cLEM-5-I9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177915 is on microarray TOM1: SGN-S1-1-8.1.6.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177915 [TUS-27-M17] | Trace: SGN-T182816 | EST: SGN-E371308 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177915 [TUS-27-M17] | Trace: SGN-T182817 | EST: SGN-E371309 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271360 | Length: 500 bp (1025 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271360 [] (trimmed)
GGCATCATGACTGGAGGCAAAGAAATCATCGACAAAATTAAGGAAAAGGTTGGTTTAAGTTCGTCAGATACCGGAAGAGGTAAGAGTAAGATGTC
GAAGAACATAACCCATGGGTATCACATGGTTGAGGGAAAATCGCATCACACCATGGAAGATTATGTTTTTGCACAGTTTAAACAAGTTGATGAAA
ATGAACTTGGTCTATTTGCAATATTTGATGGCCATTTGAGCCACGAGATTCCTGAGTACCTCCGCTCTCATCTATTCAACAATATTCTCAATGAG
CCTAACTTCTGGGCTGAACCGGAGTCTGCAATCAGGAAAGCCTACCGTATAACAGATACAACTATTTTGGATAAGGCTGCTGATTTGGGTAAAGG
AGGATCCACTGCTGTTACAGCCATATTGATTAATGGTCAGAAACTAGTTGTTGCTAATGTCGGAGATTCTCGTGCCGTCATTTACAAAAATGGAG
TGGCCAAGCAGCTGTCCATCGATCA
GAAGAACATAACCCATGGGTATCACATGGTTGAGGGAAAATCGCATCACACCATGGAAGATTATGTTTTTGCACAGTTTAAACAAGTTGATGAAA
ATGAACTTGGTCTATTTGCAATATTTGATGGCCATTTGAGCCACGAGATTCCTGAGTACCTCCGCTCTCATCTATTCAACAATATTCTCAATGAG
CCTAACTTCTGGGCTGAACCGGAGTCTGCAATCAGGAAAGCCTACCGTATAACAGATACAACTATTTTGGATAAGGCTGCTGATTTGGGTAAAGG
AGGATCCACTGCTGTTACAGCCATATTGATTAATGGTCAGAAACTAGTTGTTGCTAATGTCGGAGATTCTCGTGCCGTCATTTACAAAAATGGAG
TGGCCAAGCAGCTGTCCATCGATCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271360] | SGN-U581169 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85165 [Download][View] | Facility Assigned ID: TGFAQ53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
