EST details — SGN-C64245
| Search information |
| Request: 64245 | Match: SGN-C64245 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64245 | Clone name: cLEM-5-J1 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177916 is on microarray TOM1: SGN-S1-1-7.1.6.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177916 [TUS-27-M18] | Trace: SGN-T183037 | EST: SGN-E370662 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177916 [TUS-27-M18] | Trace: SGN-T183038 | EST: SGN-E370663 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271283 | Length: 559 bp (1010 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271283 [] (trimmed)
GGTTTAATATTTTGGCCAGAAATTTGTTGATTTCTTCAAGTTTTGGATTAATCTGCTGCTGATTGTTTCAGGAAGTTGCTTCTGGCGATATTCCC
TACTCCGAGTTACGAATGTCAGAAAAAGCAGAGCTTGCAGCGGTGAGGGCGTACTTTGGAGTGCTGTGGCCGCAACGTAATGAGGGATTATCCTA
CCATGACATCGTCCGACCCACCGATGCTGGTCTTACATTGATCGAATTCTACTTTAGGAAGTACAAAAATTCAGCTCCTTTACAAGGTTGGTTGC
AGAGAATTCAAAATAAACAGATAACAATTGATGGTAAAGTTGTTATCTTACCAGATACTGAACTCAGAGCAGGTGCTGAATTAGTATATCATCGC
CTTCCTTGGAGAGAACCTGATGCACCTTACTTGCTAGAAGTACTATTTGAAGATGACTACTTGATTGTTGTAAATAAACCTTCTGGTTTGCAAGT
TCTTCCTGGAGGGTTATATCAGCAGCGGACCGTCTTGACGCAACTCCAGTGGCATGCATGTAAGCTGACAACCACTTCGTCAGG
TACTCCGAGTTACGAATGTCAGAAAAAGCAGAGCTTGCAGCGGTGAGGGCGTACTTTGGAGTGCTGTGGCCGCAACGTAATGAGGGATTATCCTA
CCATGACATCGTCCGACCCACCGATGCTGGTCTTACATTGATCGAATTCTACTTTAGGAAGTACAAAAATTCAGCTCCTTTACAAGGTTGGTTGC
AGAGAATTCAAAATAAACAGATAACAATTGATGGTAAAGTTGTTATCTTACCAGATACTGAACTCAGAGCAGGTGCTGAATTAGTATATCATCGC
CTTCCTTGGAGAGAACCTGATGCACCTTACTTGCTAGAAGTACTATTTGAAGATGACTACTTGATTGTTGTAAATAAACCTTCTGGTTTGCAAGT
TCTTCCTGGAGGGTTATATCAGCAGCGGACCGTCTTGACGCAACTCCAGTGGCATGCATGTAAGCTGACAACCACTTCGTCAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271283] | SGN-U574545 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85088 [Download][View] | Facility Assigned ID: TGFAS49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
