EST details — SGN-C64262
| Search information |
| Request: 64262 | Match: SGN-C64262 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64262 | Clone name: cLEM-5-J9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177926 is on microarray TOM1: SGN-S1-1-5.2.6.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177926 [TUS-27-N4] | Trace: SGN-T193042 | EST: SGN-E391716 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177926 [TUS-27-N4] | Trace: SGN-T193043 | EST: SGN-E391717 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271286 | Length: 498 bp (998 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271286 [] (trimmed)
GCACATCTCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGT
TGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACAT
CTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAAC
ATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGA
TACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTT
ACATGAGCGACCCAAGTGGAAAT
TGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACAT
CTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAAC
ATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGA
TACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTT
ACATGAGCGACCCAAGTGGAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271286] | SGN-U568670 | Tomato 200607 | Build 2 | 36 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85091 [Download][View] | Facility Assigned ID: TGFAS53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0148 | Quality Trim Threshold: 14.5 |
Working
