EST details — SGN-C64461
| Search information |
| Request: 64461 | Match: SGN-C64461 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64461 | Clone name: cLEM-6-D2 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178045 is on microarray TOM1: SGN-S1-1-6.3.4.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178045 [TUS-28-C3] | Trace: SGN-T183270 | EST: SGN-E370343 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178045 [TUS-28-C3] | Trace: SGN-T183271 | EST: SGN-E370344 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270740 | Length: 497 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270740 [] (trimmed)
GCAGATCTCCACTTTCACTGCTTAAACCTTTATCCGGCGCCGCCACCGTCAACGGGGTTCTACTTTCAGTTGATGAGCTTCAGCTTTTGGGTTTC
AACTCGGTATCTCCAATTTATTTCTAATGGCCATTGACAAACTCTTCAAAGATTAAGCCTCTGAGGAAAATGGTGAACGAGCTATGATGGCATCC
TTTATCGGAGCAATGGCAATTGCTGACTTGGTAAAGACAACCTTAGGACCTAAGGGAATGGATAAAATTCTGCAATCAACAGGCAGAGGACACAG
TGTTACAGTCACCAATGATGGTGCAACAATTTTGAAATCCCTTCATATTGATAATCCAGCTGCCAAGGTCCTTGTCGATATCTCCAACGTACACG
ATGAGGAAGTTGGTGATGGGACAACTTCAGTTGTCGTTTTGGCTGGAGAACTTTTGATGGAGGCAGACAAGCTGGTAAACGCAAAAATTCATCCA
ATGACAATTATATCAGGTTTCC
AACTCGGTATCTCCAATTTATTTCTAATGGCCATTGACAAACTCTTCAAAGATTAAGCCTCTGAGGAAAATGGTGAACGAGCTATGATGGCATCC
TTTATCGGAGCAATGGCAATTGCTGACTTGGTAAAGACAACCTTAGGACCTAAGGGAATGGATAAAATTCTGCAATCAACAGGCAGAGGACACAG
TGTTACAGTCACCAATGATGGTGCAACAATTTTGAAATCCCTTCATATTGATAATCCAGCTGCCAAGGTCCTTGTCGATATCTCCAACGTACACG
ATGAGGAAGTTGGTGATGGGACAACTTCAGTTGTCGTTTTGGCTGGAGAACTTTTGATGGAGGCAGACAAGCTGGTAAACGCAAAAATTCATCCA
ATGACAATTATATCAGGTTTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270740] | SGN-U571803 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84496 [Download][View] | Facility Assigned ID: TGFAX13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0331 | Quality Trim Threshold: 14.5 |
Working
