EST details — SGN-C64462
| Search information |
| Request: 64462 | Match: SGN-C64462 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64462 | Clone name: cLEM-6-D20 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178046 is on microarray TOM1: SGN-S1-1-5.3.4.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178046 [TUS-28-C4] | Trace: SGN-T183345 | EST: SGN-E370155 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178046 [TUS-28-C4] | Trace: SGN-T183346 | EST: SGN-E370156 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270743 | Length: 568 bp (922 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270743 [] (trimmed)
GGAAAGAGAGTCGAAGCTACAGAATTTCAGTTCGGCGCTGCGGAAGCTCCATAGCCAAACTCCTTCCGCCGCAGCGTTCTTATTCAGAAATTCTC
TTGCTCCGACTCCGATCTCGATATCATAATAAGCAATGGCTCGTTCTTTCTCTAACTCTAAGACTCTCTCTGCTTTCGTCTCCGACTCCGTTTCT
GCTTTTCTCAGCAGGCGTGGATATGCAGCGGCATCACAAGGTGCAGTTTCCGGTGTAGCAAAAGGAGTGCCAAGGAGCAACGTGATGATGCAAAA
AAGTGGAGAGGAATCGGTGAAGACTTCATGGGTGCCAGATCCAGTTACCGGTTACTATAGGCCGGAAGGACAAGCAAATGAGATTGACGCTGCTG
AGCTCCGGAAGATGCTGTTGAAACACAGATCTGGAAGCAACTGAAAATCTTTGAAGCTGCGCCGTTGATCTCCGGTTACTCATCGGAGATTTTCG
ATCAACGAGAAAAGAGAATTTAGTGAAGGAACTGTTTTATCAGAAAAATATAACAGTGTGAAATTTACTCGTGCTTTGTTGCTTTTAAATTTT
TTGCTCCGACTCCGATCTCGATATCATAATAAGCAATGGCTCGTTCTTTCTCTAACTCTAAGACTCTCTCTGCTTTCGTCTCCGACTCCGTTTCT
GCTTTTCTCAGCAGGCGTGGATATGCAGCGGCATCACAAGGTGCAGTTTCCGGTGTAGCAAAAGGAGTGCCAAGGAGCAACGTGATGATGCAAAA
AAGTGGAGAGGAATCGGTGAAGACTTCATGGGTGCCAGATCCAGTTACCGGTTACTATAGGCCGGAAGGACAAGCAAATGAGATTGACGCTGCTG
AGCTCCGGAAGATGCTGTTGAAACACAGATCTGGAAGCAACTGAAAATCTTTGAAGCTGCGCCGTTGATCTCCGGTTACTCATCGGAGATTTTCG
ATCAACGAGAAAAGAGAATTTAGTGAAGGAACTGTTTTATCAGAAAAATATAACAGTGTGAAATTTACTCGTGCTTTGTTGCTTTTAAATTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270743] | SGN-U580139 | Tomato 200607 | Build 2 | 487 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84499 [Download][View] | Facility Assigned ID: TGFAX22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 12.5 |
Working
