EST details — SGN-C64477
| Search information |
| Request: 64477 | Match: SGN-C64477 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64477 | Clone name: cLEM-6-E15 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178057 is on microarray TOM1: SGN-S1-1-2.3.4.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178057 [TUS-28-C15] | Trace: SGN-T183275 | EST: SGN-E370348 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178057 [TUS-28-C15] | Trace: SGN-T183276 | EST: SGN-E370349 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270794 | Length: 563 bp (975 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270794 [] (trimmed)
GTGGAATTGTATTTCACCTAAAATATATATTTACTCACATCGCTATAAATAAATAAATAAATTACTATTTTAGAACATTATATATTCAATTTCCC
CTCCCGGTTAATTTATTCAACTTTATTTCCTCCAGTGAGACGGCGAAATCGGAACCGGTAAAAGGAACTCCGACGATTGCTCCGGTGGTGTTAAT
GGGTCTCAAGGCGTAGTTTTGAATACTGATGTCATTGTTCTGGATTGTGATTCGCGAATTAGCAGAAATCGAAGCCATGGCAACATCAAAGAAAG
TAATCACGAGAGAAGATTGGGAGAAAAGGCTCAATGATGTAAAAATTAGAAAAGAAGATATGAATAAGTTAGTGATGAACTTTTTGGTCACAGAG
GGTTATGTTGAAGCAGCAGAAAAGTTCAGAAAAGAATCTGGAACAGATCCTGATATAGATCTTGCTACTATCACTGATAGAATGGCGGTTAAAAA
GGCAGTACAGGCTGGTAATGTAGAGGATGCAATTGAGAAGGTTAATGATTTGAATCCTGAGATACTGGATACAAACCCCCAGCTCTTT
CTCCCGGTTAATTTATTCAACTTTATTTCCTCCAGTGAGACGGCGAAATCGGAACCGGTAAAAGGAACTCCGACGATTGCTCCGGTGGTGTTAAT
GGGTCTCAAGGCGTAGTTTTGAATACTGATGTCATTGTTCTGGATTGTGATTCGCGAATTAGCAGAAATCGAAGCCATGGCAACATCAAAGAAAG
TAATCACGAGAGAAGATTGGGAGAAAAGGCTCAATGATGTAAAAATTAGAAAAGAAGATATGAATAAGTTAGTGATGAACTTTTTGGTCACAGAG
GGTTATGTTGAAGCAGCAGAAAAGTTCAGAAAAGAATCTGGAACAGATCCTGATATAGATCTTGCTACTATCACTGATAGAATGGCGGTTAAAAA
GGCAGTACAGGCTGGTAATGTAGAGGATGCAATTGAGAAGGTTAATGATTTGAATCCTGAGATACTGGATACAAACCCCCAGCTCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270794] | SGN-U566589 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84550 [Download][View] | Facility Assigned ID: TGFAU32TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
