EST details — SGN-C64517
| Search information |
| Request: 64517 | Match: SGN-C64517 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64517 | Clone name: cLEM-6-F9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178080 is on microarray TOM1: SGN-S1-1-3.4.4.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178080 [TUS-28-D14] | Trace: SGN-T183697 | EST: SGN-E370765 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178080 [TUS-28-D14] | Trace: SGN-T183698 | EST: SGN-E370766 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270883 | Length: 533 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270883 [] (trimmed)
GCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCG
TCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGT
TTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTT
TTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTG
CACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAG
CATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCACATAGCTAGTTTTTTGCAAT
TCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGT
TTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTT
TTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTG
CACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAG
CATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCACATAGCTAGTTTTTTGCAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270883] | SGN-U572228 | Tomato 200607 | Build 2 | 46 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84639 [Download][View] | Facility Assigned ID: TGFAW29TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
