EST details — SGN-C65035
| Search information |
| Request: 65035 | Match: SGN-C65035 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65035 | Clone name: cLEM-8-C14 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178233 is on microarray TOM1: SGN-S1-1-2.2.4.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178233 [TUS-28-J23] | Trace: SGN-T183577 | EST: SGN-E371217 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178233 [TUS-28-J23] | Trace: SGN-T183578 | EST: SGN-E371218 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271805 | Length: 511 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271805 [] (trimmed)
GGGTGGTGTTGTCTCCTCCCCCTCATGGGAAAGGAAGGCTTCATCTGAAGGTAGTCATGGTCTGGCTCCTTCTACACCTGGAAGATCCCGTTTGA
GACCAGTTGCAAAAGGTGATGACACGCCTGATGACAGCCCTGCTGTTCCTAAATTTGGTGACTGGGATGAGAATGATCCTGCATCAGCAGAAGGT
TACACGCAAATCTTTAACAAAGTGCGAGAGGAGAAGCAGACTGGTTCAGCAAAAGTACCTTCCTCATCAACTGATACATCTTACTCCAACAGTCA
AAAGCGATATGGAAATGACAGTGGAAAGGGTTGTTTATGTTTCCCATGGGGTCGAAGTTGACAATGCTGAGGATGAGACAAACAAAAAATGCAAA
TGGGCATGTACCCTATTTTAAAACATGAAACATTGGTTATGTATAGATTGTAGATCTCTTTAGTATATATGTTGTTCATTGTGTGCTTTAGACTT
TAATATTTTGCTTTACAAACCAGAAAAAAGATTGAG
GACCAGTTGCAAAAGGTGATGACACGCCTGATGACAGCCCTGCTGTTCCTAAATTTGGTGACTGGGATGAGAATGATCCTGCATCAGCAGAAGGT
TACACGCAAATCTTTAACAAAGTGCGAGAGGAGAAGCAGACTGGTTCAGCAAAAGTACCTTCCTCATCAACTGATACATCTTACTCCAACAGTCA
AAAGCGATATGGAAATGACAGTGGAAAGGGTTGTTTATGTTTCCCATGGGGTCGAAGTTGACAATGCTGAGGATGAGACAAACAAAAAATGCAAA
TGGGCATGTACCCTATTTTAAAACATGAAACATTGGTTATGTATAGATTGTAGATCTCTTTAGTATATATGTTGTTCATTGTGTGCTTTAGACTT
TAATATTTTGCTTTACAAACCAGAAAAAAGATTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271805] | SGN-U574184 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85356 [Download][View] | Facility Assigned ID: TGFBD19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0248 | Quality Trim Threshold: 12.5 |
Working
