EST details — SGN-C65087
| Search information |
| Request: 65087 | Match: SGN-C65087 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65087 | Clone name: cLEM-8-E3 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178267 is on microarray TOM1: SGN-S1-1-8.4.4.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178267 [TUS-28-L9] | Trace: SGN-T183507 | EST: SGN-E371147 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178267 [TUS-28-L9] | Trace: SGN-T183508 | EST: SGN-E371148 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271761 | Length: 657 bp (841 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271761 [] (trimmed)
GAAGGTGTTCGCTGTCAGAAACTAAATACAGATTGTTCATTGGTAGTGTACCAAAGAGCTGGGCTGATGATGACTTCAGAAAAGTCATTGATGGG
ACTGGTCCTGGTGCAGAATTAATAGAACTCATAAAGGATCCTCAAAACCCAGCACGTAATAGGGGTTTTGCTTTTGTTGAATATTACAATAATGC
CTGTGCGGATTACTCTCGGAGAAAAATGGTAAGTACAAACTTTAAGCTGGAGGGAAATTCACCAACTGTCACCTGGGCTGATCCGAAGATTACAC
CTGATCATTCTTCTGCCGCTGCTCAGGTCAAAGCACTCTATGTGAAGAACATTCCAGAAAACACTCCTACTGAACAATTGAAGGAATTGTTCCAA
CGCCATGGTGAAGTTACCAGAGTTGTTATGCCACCAGCCAAGGTTGGTGGTAAACGAGACTTTGGATTTGTCCATTATGCAGAAAGGTCAAGCGC
TCTGAAAGCTGTCAAAGACACTGAAACATATGAAGTAAATGGTCAGATGTTAGAAGTAGTTCTTGCAAAGCCTCAGACTGAAAAGAAGTTTGATG
CAGCTAGTCCTCACAATGCGATGCCACATCATAATTATATTCCCCATCCAGGCTATGGTGCATTTCCGATGAACCCGTATGCACCTC
ACTGGTCCTGGTGCAGAATTAATAGAACTCATAAAGGATCCTCAAAACCCAGCACGTAATAGGGGTTTTGCTTTTGTTGAATATTACAATAATGC
CTGTGCGGATTACTCTCGGAGAAAAATGGTAAGTACAAACTTTAAGCTGGAGGGAAATTCACCAACTGTCACCTGGGCTGATCCGAAGATTACAC
CTGATCATTCTTCTGCCGCTGCTCAGGTCAAAGCACTCTATGTGAAGAACATTCCAGAAAACACTCCTACTGAACAATTGAAGGAATTGTTCCAA
CGCCATGGTGAAGTTACCAGAGTTGTTATGCCACCAGCCAAGGTTGGTGGTAAACGAGACTTTGGATTTGTCCATTATGCAGAAAGGTCAAGCGC
TCTGAAAGCTGTCAAAGACACTGAAACATATGAAGTAAATGGTCAGATGTTAGAAGTAGTTCTTGCAAAGCCTCAGACTGAAAAGAAGTTTGATG
CAGCTAGTCCTCACAATGCGATGCCACATCATAATTATATTCCCCATCCAGGCTATGGTGCATTTCCGATGAACCCGTATGCACCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271761] | SGN-U581107 | Tomato 200607 | Build 2 | 41 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85312 [Download][View] | Facility Assigned ID: TGFBC26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
