EST details — SGN-C65204
| Search information |
| Request: 65204 | Match: SGN-C65204 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65204 | Clone name: cLEM-8-K10 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178330 is on microarray TOM1: SGN-S1-1-1.2.4.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178330 [TUS-28-N24] | Trace: SGN-T183679 | EST: SGN-E370747 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178330 [TUS-28-N24] | Trace: SGN-T183680 | EST: SGN-E370748 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271823 | Length: 603 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271823 [] (trimmed)
GCTGGATGGACTAACGATTGATGAGGCGATCAACAGTAATAAACTTTTCATATTGAACCATCATGATGTTCTTATACCATATTTGAGGAGGATAA
ACACTACAACAACGAAAACATATGCCTCGAGAACTTTGCTATTCTTGCAAGATAATGGATCTTTGAAGCCACTAGCAATTGAATTGAGTTTGCCA
CATCCAGATGGAGATCAATTTGGTGTTACTAGTAAAGTGTATACTCCAAGTGATCAAAGTGTTGAGGGCTCTATCTGGCAATTGGCTAAAGCTTA
TGTTGCGGTGAATGACTCTGGTGTTCATCAACTGATTAGTCATTGGTTGAATACACATGCTGTGATCGAGCCATTTGTGATTGCAACAAACAGGC
AACTAAGTGTGCTTCACCCTATTCATAAGCTTCTATATCCTCATTTCCGGGACACAATGAATATTAATGCTTTGGCAAGACAGATCCTAATCAAT
GCTGGTGGAGTTCTTGAGAGTACAGTTTTCCCTTCCAAATTTGCCATGGAAATGTCAGCTGTCGTTTACAAAGACTGGGTCTTCCCTGATCAAGC
CCTTCCAGCTGATCTTGTTAAGAGGGGAGTAGC
ACACTACAACAACGAAAACATATGCCTCGAGAACTTTGCTATTCTTGCAAGATAATGGATCTTTGAAGCCACTAGCAATTGAATTGAGTTTGCCA
CATCCAGATGGAGATCAATTTGGTGTTACTAGTAAAGTGTATACTCCAAGTGATCAAAGTGTTGAGGGCTCTATCTGGCAATTGGCTAAAGCTTA
TGTTGCGGTGAATGACTCTGGTGTTCATCAACTGATTAGTCATTGGTTGAATACACATGCTGTGATCGAGCCATTTGTGATTGCAACAAACAGGC
AACTAAGTGTGCTTCACCCTATTCATAAGCTTCTATATCCTCATTTCCGGGACACAATGAATATTAATGCTTTGGCAAGACAGATCCTAATCAAT
GCTGGTGGAGTTCTTGAGAGTACAGTTTTCCCTTCCAAATTTGCCATGGAAATGTCAGCTGTCGTTTACAAAGACTGGGTCTTCCCTGATCAAGC
CCTTCCAGCTGATCTTGTTAAGAGGGGAGTAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271823] | SGN-U578891 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85374 [Download][View] | Facility Assigned ID: TGFBD65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
