EST details — SGN-C65294
| Search information |
| Request: 65294 | Match: SGN-C65294 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65294 | Clone name: cLEM-8-O15 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178393 is on microarray TOM1: SGN-S1-1-2.1.4.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178393 [TUS-29-A15] | Trace: SGN-T183816 | EST: SGN-E370475 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178393 [TUS-29-A15] | Trace: SGN-T183817 | EST: SGN-E370476 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271953 | Length: 623 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271953 [] (trimmed)
GGCTTCAACTACTCACCTTGACGAGAAAATGTCTCTGCTAATTCGAAGGTTTGTAGTTGTAGGCTTGATTGTTCTGCTGAGCTTTGCCGTATTGA
GTGAAGCTGAAGCATCCTATGGAGCTTACAAAGTCGAAGTCATCAATGAATTCCCTCACGACCCCGAAGCTTACACTGAGGGGCTTCTCTACGCA
GAAAATGACACACTCTTTGAATCAACTGGACTTTACGGACGTTCATCTGTTCGGAAAGTTGCATTGCTGAATGGTAAGGTTGAGACTGTTCATGA
CATGCAGGCTTCTGACTTTGGAGAGGGTTTAGCTCTTCTTGGTGAGAGCTTGTTCCAACTAACATGGTTGCAGGATACTGGTTTCATATATGATC
GATACAACTTTAGCAAATTCAAAAAGTTTACTCATCACATGCAAGATGGTTGGGGATTGGCAACTGATGGGAAAGTACTTTTTGGAAGTGATGGA
ACATCAACATTATATAAGATTGACCCTAAGACAATGAAAGTCATCAGAAAACAAGTTGTCAAGTCTCAAGGGCATGAAGTGCACTACCTCAATGA
GCTGGAGTATGTGAAAGAGGAAGTATGGTCAAATGTCTATGCGACTGATTGCA
GTGAAGCTGAAGCATCCTATGGAGCTTACAAAGTCGAAGTCATCAATGAATTCCCTCACGACCCCGAAGCTTACACTGAGGGGCTTCTCTACGCA
GAAAATGACACACTCTTTGAATCAACTGGACTTTACGGACGTTCATCTGTTCGGAAAGTTGCATTGCTGAATGGTAAGGTTGAGACTGTTCATGA
CATGCAGGCTTCTGACTTTGGAGAGGGTTTAGCTCTTCTTGGTGAGAGCTTGTTCCAACTAACATGGTTGCAGGATACTGGTTTCATATATGATC
GATACAACTTTAGCAAATTCAAAAAGTTTACTCATCACATGCAAGATGGTTGGGGATTGGCAACTGATGGGAAAGTACTTTTTGGAAGTGATGGA
ACATCAACATTATATAAGATTGACCCTAAGACAATGAAAGTCATCAGAAAACAAGTTGTCAAGTCTCAAGGGCATGAAGTGCACTACCTCAATGA
GCTGGAGTATGTGAAAGAGGAAGTATGGTCAAATGTCTATGCGACTGATTGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271953] | SGN-U574948 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85504 [Download][View] | Facility Assigned ID: TGFBC92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |
Working
