EST details — SGN-C65295
| Search information |
| Request: 65295 | Match: SGN-C65295 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65295 | Clone name: cLEM-8-O16 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178394 is on microarray TOM1: SGN-S1-1-1.1.4.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178394 [TUS-29-A16] | Trace: SGN-T183883 | EST: SGN-E371554 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178394 [TUS-29-A16] | Trace: SGN-T183884 | EST: SGN-E371555 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271836 | Length: 541 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271836 [] (trimmed)
GAACAGGATGACTGTATAGTCTGTAGACATTGAAATTCAAAAAAGAAGAAAATTTATCTCAACATAAAAGCTTAAAAAAGGATGCAATATCTTGA
TATCTTTACAGCTAAGTGTGTGTATTCGCAAAGCATGAGAAACAGTTTTAGTTATTCAGTCTGGTTCTACTCCTTCAAAATCATCCAGTACTTCT
TTCCAAATTGCAGTGTCACCTTCATATTGGACACAATTATTGCTTGGGTGCCAAACTTGCTTCAGCGTCACTGCTGCGTTTTGCATCTTCAAACT
TATCAATGGCTACTTGAAGTTCATCTGAGCCTCCAACAGCTCTCATAGTGTAGTAGTACACACCAAAAACAAATCCTGTCAAACCTCCAGCCATA
ACCAGATTCTTAGTCTTGGGAGCAAGGGCGCTGTATCCTGGAAGTCCAGCCATCTTCTCAGAAAGAACTAACCTAAGACTTTTGTATTCTGCTTT
TTTCTCCTGGAAATCTTGGTGAAGAAAGAAGCTGAAGGGAGGAGGTCGCTAGGGTTTCTGCAACTG
TATCTTTACAGCTAAGTGTGTGTATTCGCAAAGCATGAGAAACAGTTTTAGTTATTCAGTCTGGTTCTACTCCTTCAAAATCATCCAGTACTTCT
TTCCAAATTGCAGTGTCACCTTCATATTGGACACAATTATTGCTTGGGTGCCAAACTTGCTTCAGCGTCACTGCTGCGTTTTGCATCTTCAAACT
TATCAATGGCTACTTGAAGTTCATCTGAGCCTCCAACAGCTCTCATAGTGTAGTAGTACACACCAAAAACAAATCCTGTCAAACCTCCAGCCATA
ACCAGATTCTTAGTCTTGGGAGCAAGGGCGCTGTATCCTGGAAGTCCAGCCATCTTCTCAGAAAGAACTAACCTAAGACTTTTGTATTCTGCTTT
TTTCTCCTGGAAATCTTGGTGAAGAAAGAAGCTGAAGGGAGGAGGTCGCTAGGGTTTCTGCAACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271836] | SGN-U579433 | Tomato 200607 | Build 2 | 67 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85387 [Download][View] | Facility Assigned ID: TGFBD92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |
Working
