EST details — SGN-C67071
| Search information |
| Request: 67071 | Match: SGN-C67071 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C67071 | Clone name: cLEN-17-F21 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181061 is on microarray TOM1: SGN-S1-1-6.4.17.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181061 [TUS-35-P19] | Trace: SGN-T196431 | EST: SGN-E395105 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181061 [TUS-35-P19] | Trace: SGN-T197738 | EST: SGN-E396412 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276427 | Length: 611 bp (836 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276427 [] (trimmed)
ACCATATACACAAGGAGGCCTCAGCAAAGGGATACTATGTTAAGGATGCTACTGGTAAGGATTATGATGGATGGTGCTGGCCTGGTTCCTCATCA
TATACTGACCTGCTGAATCCCGAGATTAGGTCATGGTGGAGTGACAAATTTTCACTTGATAGCTATGTTGGCTCGACAAAGTATTTATACATCTG
GAATGACATGAATGAACCTTCCGTCTTCAATGGACCAGAGGTAACAATGCCAAGAGATGCTTTACATCATGGAGGAGTAGAGCACAGGGAGTTGC
ACAATTCATATGGTTACTATTTCCATATGGCAACATCCGACGGGCTTCTAAAGCGTGGAGATGGAAAAGATAGGCCTTTTGTTTTGGCAAGGGCT
TTCTTTGCCGGAAGTCAAAGATATGGAGCAATTTGGACTGGAGATAATACAGCAGAATGGGAGCACTTAAGGGTTTCAGTCCCCATGGTGTTAAC
TCTTAGCATCTCTGGAATAGTCTTTTCTGGTGCAGATGTTGGTGGATTTTTTGGTAATCCTGACGCTGAATTGTTGGTTCGCTGGTATCAATTAG
GTGCATATTATCCCTTTTTCCGGGGCCATGCACATCATGAC
TATACTGACCTGCTGAATCCCGAGATTAGGTCATGGTGGAGTGACAAATTTTCACTTGATAGCTATGTTGGCTCGACAAAGTATTTATACATCTG
GAATGACATGAATGAACCTTCCGTCTTCAATGGACCAGAGGTAACAATGCCAAGAGATGCTTTACATCATGGAGGAGTAGAGCACAGGGAGTTGC
ACAATTCATATGGTTACTATTTCCATATGGCAACATCCGACGGGCTTCTAAAGCGTGGAGATGGAAAAGATAGGCCTTTTGTTTTGGCAAGGGCT
TTCTTTGCCGGAAGTCAAAGATATGGAGCAATTTGGACTGGAGATAATACAGCAGAATGGGAGCACTTAAGGGTTTCAGTCCCCATGGTGTTAAC
TCTTAGCATCTCTGGAATAGTCTTTTCTGGTGCAGATGTTGGTGGATTTTTTGGTAATCCTGACGCTGAATTGTTGGTTCGCTGGTATCAATTAG
GTGCATATTATCCCTTTTTCCGGGGCCATGCACATCATGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276427] | SGN-U566569 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90848 [Download][View] | Facility Assigned ID: TRRCO35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
