EST details — SGN-C67219
| Search information |
| Request: 67219 | Match: SGN-C67219 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C67219 | Clone name: cLEN-17-N4 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183017 is on microarray TOM1: SGN-S1-1-2.2.3.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183017 [TUS-41-B7] | Trace: SGN-T195163 | EST: SGN-E393837 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183017 [TUS-41-B7] | Trace: SGN-T195332 | EST: SGN-E394006 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183017 [TUS-41-B7] | Trace: SGN-T195616 | EST: SGN-E398837 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183017 [TUS-41-B7] | Trace: SGN-T195807 | EST: SGN-E394481 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183017 [TUS-41-B7] | Trace: SGN-T195807 | EST: SGN-E399505 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276620 | Length: 560 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276620 [] (trimmed)
GAACTCATGCAATGCTCTTCTTCTCAAGGTTAATCAGATTGGTACAGTGACGGAAGCCATTGAAGTTGTCAAGATGGCCAAGGATGCCCAATGGG
GGGTTGTGATATCTCAAAGACTTGGTGAAACTGAAGACAGTTTCATATCTGATTTATCTGTTGGCTTAGCTACTAGTCAAATTAAAGCTGGTGCC
CCTTGCCGAGGAGAACGACTTGCAAAGTACAACCAGTTGCTTAGAATTGAAGAAGAGCTTGGTGATCAAGCAGTTTATACTGGTGAAAAGTGGAG
GAACTGATCTTTTTTTCATCAGAATTCTGGTTTTGGACCATTCCATTTAGCAGTGGCACTATCTCTTTCAGTTTGCAGCACAACAACTACAGTTC
TGAACATTCTTCCCACTGTGCATTACACTTGAAAATGCTACAGTGTCTTCTAGCTTTGTACTAATGATTGCGGTTTGCGAGATGAGCTTGTTTGT
TCTATGTACTAGTATTTACATCTAAATTTTTTCTGTATCTAGGTACATTTGTAGATCAACTTGAAGAGCAATCATAAATTAATTT
GGGTTGTGATATCTCAAAGACTTGGTGAAACTGAAGACAGTTTCATATCTGATTTATCTGTTGGCTTAGCTACTAGTCAAATTAAAGCTGGTGCC
CCTTGCCGAGGAGAACGACTTGCAAAGTACAACCAGTTGCTTAGAATTGAAGAAGAGCTTGGTGATCAAGCAGTTTATACTGGTGAAAAGTGGAG
GAACTGATCTTTTTTTCATCAGAATTCTGGTTTTGGACCATTCCATTTAGCAGTGGCACTATCTCTTTCAGTTTGCAGCACAACAACTACAGTTC
TGAACATTCTTCCCACTGTGCATTACACTTGAAAATGCTACAGTGTCTTCTAGCTTTGTACTAATGATTGCGGTTTGCGAGATGAGCTTGTTTGT
TCTATGTACTAGTATTTACATCTAAATTTTTTCTGTATCTAGGTACATTTGTAGATCAACTTGAAGAGCAATCATAAATTAATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276620] | SGN-U574678 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91041 [Download][View] | Facility Assigned ID: TRRCP74TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 12.5 |
Working
