EST details — SGN-C67796
| Search information |
| Request: 67796 | Match: SGN-C67796 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C67796 | Clone name: cLEN-21-G4 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183180 is on microarray TOM1: SGN-S1-1-7.1.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183180 [TUS-41-I2] | Trace: SGN-T196507 | EST: SGN-E395181 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183180 [TUS-41-I2] | Trace: SGN-T199467 | EST: SGN-E398141 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276277 | Length: 648 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276277 [] (trimmed)
CTCAGGATGAGGATGTTTTCATGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCGATGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGAC
ATTATAGCGAATGCAGTGGTGGCACAAGATGGAACGGGGGATTATCAAACACTTGCTGAAGCAGTTGCTGCAGCACCAGATAAGAGTAAGACGCG
TTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGGCTAGCAATAAAATGAACTTGATGATTGTTGGTGATGGAATGTATG
CTACGACCATTACTGGTAGCCTTAATGTTGTCGATGGATCAACAACCTTCCGCTCTGCCACTCTTGCTGCAGTCGGCCAAGGATTTATACTACAG
GACATATGTATACAGAACACAGCAGGGCCAGCGAAAGACCAAGCAGTGGCACTTCGAGTTGGAGCTGATATGTCTGTCATAAATCGTTGTCGTAT
CGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAGGTACTGTTGATTTCATATTTGGTAATG
CAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAG
ATTATAGCGAATGCAGTGGTGGCACAAGATGGAACGGGGGATTATCAAACACTTGCTGAAGCAGTTGCTGCAGCACCAGATAAGAGTAAGACGCG
TTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGGCTAGCAATAAAATGAACTTGATGATTGTTGGTGATGGAATGTATG
CTACGACCATTACTGGTAGCCTTAATGTTGTCGATGGATCAACAACCTTCCGCTCTGCCACTCTTGCTGCAGTCGGCCAAGGATTTATACTACAG
GACATATGTATACAGAACACAGCAGGGCCAGCGAAAGACCAAGCAGTGGCACTTCGAGTTGGAGCTGATATGTCTGTCATAAATCGTTGTCGTAT
CGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAGGTACTGTTGATTTCATATTTGGTAATG
CAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276277] | SGN-U563074 | Tomato 200607 | Build 2 | 161 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91536 [Download][View] | Facility Assigned ID: TRRDD38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
