EST details — SGN-C68710
| Search information |
| Request: 68710 | Match: SGN-C68710 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C68710 | Clone name: cLEN-7-H7 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183518 is on microarray TOM1: SGN-S1-1-5.3.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183518 [TUS-42-G4] | Trace: SGN-T196021 | EST: SGN-E399574 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183518 [TUS-42-G4] | Trace: SGN-T196133 | EST: SGN-E394807 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183518 [TUS-42-G4] | Trace: SGN-T200293 | EST: SGN-E399255 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E273917 | Length: 542 bp (740 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E273917 [] (trimmed)
TCTAAATTATCGATAGATTTATTGTTTCAGATGGAGGAGGAGAAACACCACCACCACCACCTGTTCCACCACAAGGACAAGGCGGAGGAGGGCCC
CGTCGACTACGAAAAAGAAATCAAACACCATAAACATCTCGAGCAAATCGGTAAACTTGGCACTGTTGCTGCCGGTGCCTACGCCTTGCATGAGA
AACATGAGGCAAAGAAAGATCCAGAACATGCACACAAACACAAGATAGAGGAAGAGATAGCAGCAGCTGCTGCAGTTGGGGCAGGTGGATTTGCA
TTCCATGAGCATCATGAGAAAAAAGATGCCAAGAAAGAAGAAAAAAAAGCTGAGGGGGGACACCACCATCTCTTCTAAATTGTTATTTTAGTTAC
ATTTTTAATATTCGTGGAATTTCCATATTTGGTATAAGTGTTGTGTCATCTTATCATATATCGTGCATAATAACAATAAATTTAGTGTGATATTA
TAAATGGATCGAGTTAAAAAAAAAGAGCAAAAGTCAAAATATATTTTACCAATCTCGTGTGATGTAA
CGTCGACTACGAAAAAGAAATCAAACACCATAAACATCTCGAGCAAATCGGTAAACTTGGCACTGTTGCTGCCGGTGCCTACGCCTTGCATGAGA
AACATGAGGCAAAGAAAGATCCAGAACATGCACACAAACACAAGATAGAGGAAGAGATAGCAGCAGCTGCTGCAGTTGGGGCAGGTGGATTTGCA
TTCCATGAGCATCATGAGAAAAAAGATGCCAAGAAAGAAGAAAAAAAAGCTGAGGGGGGACACCACCATCTCTTCTAAATTGTTATTTTAGTTAC
ATTTTTAATATTCGTGGAATTTCCATATTTGGTATAAGTGTTGTGTCATCTTATCATATATCGTGCATAATAACAATAAATTTAGTGTGATATTA
TAAATGGATCGAGTTAAAAAAAAAGAGCAAAAGTCAAAATATATTTTACCAATCTCGTGTGATGTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E273917] | SGN-U581076 | Tomato 200607 | Build 2 | 416 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88613 [Download][View] | Facility Assigned ID: TRRBA40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 14.5 |
Working
