EST details — SGN-E690272
| Search information |
| Request: 690272 | Match: SGN-E690272 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C467278 | Clone name: LH_Ea03B06 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C467278 [LH_Ea03B06] | Trace: SGN-T493378 | EST: SGN-E694112 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E690272 | Length: 721 bp (1017 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E690272 [] (trimmed)
CCTTCTTCTCCCTTTGAGCTCATTTATTATCACAAAATCCACTTAACCATTTTTTTTTGTTCAAACAAAATTATTATCAATGGCAAATTTGATTT
CAAAATCAACAAAATTTAACCATTTTCTTCTAAACACAAGAGTTTGTTTCTTACGATCGTTTACAACTTCTGCCGCCGGCGCCGGTGCTGGTGGT
TATATTAAGCCGGGGGGGAGTTTTTCCGGCGAGTCTGCCGCCATTTTTCGGCCGGAACGTTACCAGTCCGGTAAAGCTGGAGAGCAACTAGATAC
AATTGACTATGAAGAAGATGAAAATCAGGTGATGGATTTTCCTGGTGGAAAAGTTCCAATTACTCCTCAAATGAAATTTATTTCGGAGTCGTCTG
AGAAGAGATTACCTTGTTATAGAGTTCTTGATGATGATGGTTATCCACTTCCAGGGACAATCTTTGAGGAGGTGAGCAAAGAATTGGCAATAAAG
ATGTATAGCTCAATGGTGACGCTTCAAACTATGGATACCATTTTTTATGAAGCGCAAAGGCAGGGGAGGTTGTCGTTCTATCTCACAACTGCTGG
AGAAGAAGCTATCAACGTAGCATCTGCTGCTGCTCTTTCCTTAGACGACTTCGTGTTACCTCAGTACAGGGAAGTAGGGGTTATATTATGGCGTG
GTTACCCCTTGGAACAGGTTGCCAATCAATTGTTCGGAAACAAGTTTGATTATGGA
CAAAATCAACAAAATTTAACCATTTTCTTCTAAACACAAGAGTTTGTTTCTTACGATCGTTTACAACTTCTGCCGCCGGCGCCGGTGCTGGTGGT
TATATTAAGCCGGGGGGGAGTTTTTCCGGCGAGTCTGCCGCCATTTTTCGGCCGGAACGTTACCAGTCCGGTAAAGCTGGAGAGCAACTAGATAC
AATTGACTATGAAGAAGATGAAAATCAGGTGATGGATTTTCCTGGTGGAAAAGTTCCAATTACTCCTCAAATGAAATTTATTTCGGAGTCGTCTG
AGAAGAGATTACCTTGTTATAGAGTTCTTGATGATGATGGTTATCCACTTCCAGGGACAATCTTTGAGGAGGTGAGCAAAGAATTGGCAATAAAG
ATGTATAGCTCAATGGTGACGCTTCAAACTATGGATACCATTTTTTATGAAGCGCAAAGGCAGGGGAGGTTGTCGTTCTATCTCACAACTGCTGG
AGAAGAAGCTATCAACGTAGCATCTGCTGCTGCTCTTTCCTTAGACGACTTCGTGTTACCTCAGTACAGGGAAGTAGGGGTTATATTATGGCGTG
GTTACCCCTTGGAACAGGTTGCCAATCAATTGTTCGGAAACAAGTTTGATTATGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E690272] | SGN-U570746 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T497041 [Download][View] | Facility Assigned ID: LH_Ea03B06.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
