EST details — SGN-E692853
| Search information |
| Request: 692853 | Match: SGN-E692853 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C469859 | Clone name: LH_Ea09M19 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C469859 [LH_Ea09M19] | Trace: SGN-T490728 | EST: SGN-E696693 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E692853 | Length: 877 bp (1093 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E692853 [] (trimmed)
TCAAAATGCAGAGCACAGCAATCTCGTTTTCTCCGTCACTTTCACTCCCTAAGAAGCCTCACAAGCCGTCCAGTTCCGCTTCGTTTTGTAGATTT
AATCCTTTATCTCAGCCGCTTCGTTTTGGATCCCTAAACGGTTCAACATCGAGGAAAATCAATCCATTTAGATGTTCAGCGGATTCTTCTTCGTC
AAAGTTAAATCGTAATGGATGGATTTCAGTTCCGGCTCCGGTTCCAGAGCGTCAGTCGGATGGAGTGGAGGTTCGAGCCACGTCTCTGCCGGACA
GCGCTGGAGAGGCACCCAAATCTAAGCCTTTGATGGAAACTGTGGTGCTCGGATCTCTTTTCGGGCTTTGGTATCTATTTAACATCTACTTCAAC
ATTTACAACAAACAGGTGCTGAAAGCATTCCCTTACCCAGTTACAGTGACTCTCGCACAATTTGCTGTTGGCTCCGTCCTTGTAATTCTAATGTG
GACTCTCAATCTATACAAAAGGCCAAAAATCAGCGGTGCACAGCTTGTTGCAATTTTGCCATTGGCAGCGGTGCATACCTTGGGCAACCTTTTCA
CCAACATGAGTCTTGGAAAAGTTTCTGTGTCATTCACTCACACTATCAAAGCTATGGAGCCATTCTTCTCTGTTATCCTCTCTGCTATGTTCTTA
GGCGAGTTCCCTACCTTGTGGGTTTTATCTTCTCTTGTACCAATTGTTGGTGGAGTGGGACTGGCATCAATGACTGAGGCATCTTTTAATTGGGC
TGGATTTTGGAGTGCAATGGCCTCTAATTTAACCAACCAATCTCGTAATGTCCTCAGCAAGAAGTTTATGGTTCGGAAAGAGGAGTCATTGGATA
ACATTACTCTCCTCTCAATAAT
AATCCTTTATCTCAGCCGCTTCGTTTTGGATCCCTAAACGGTTCAACATCGAGGAAAATCAATCCATTTAGATGTTCAGCGGATTCTTCTTCGTC
AAAGTTAAATCGTAATGGATGGATTTCAGTTCCGGCTCCGGTTCCAGAGCGTCAGTCGGATGGAGTGGAGGTTCGAGCCACGTCTCTGCCGGACA
GCGCTGGAGAGGCACCCAAATCTAAGCCTTTGATGGAAACTGTGGTGCTCGGATCTCTTTTCGGGCTTTGGTATCTATTTAACATCTACTTCAAC
ATTTACAACAAACAGGTGCTGAAAGCATTCCCTTACCCAGTTACAGTGACTCTCGCACAATTTGCTGTTGGCTCCGTCCTTGTAATTCTAATGTG
GACTCTCAATCTATACAAAAGGCCAAAAATCAGCGGTGCACAGCTTGTTGCAATTTTGCCATTGGCAGCGGTGCATACCTTGGGCAACCTTTTCA
CCAACATGAGTCTTGGAAAAGTTTCTGTGTCATTCACTCACACTATCAAAGCTATGGAGCCATTCTTCTCTGTTATCCTCTCTGCTATGTTCTTA
GGCGAGTTCCCTACCTTGTGGGTTTTATCTTCTCTTGTACCAATTGTTGGTGGAGTGGGACTGGCATCAATGACTGAGGCATCTTTTAATTGGGC
TGGATTTTGGAGTGCAATGGCCTCTAATTTAACCAACCAATCTCGTAATGTCCTCAGCAAGAAGTTTATGGTTCGGAAAGAGGAGTCATTGGATA
ACATTACTCTCCTCTCAATAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E692853] | SGN-U577172 | Tomato 200607 | Build 2 | 56 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T494471 [Download][View] | Facility Assigned ID: LH_Ea09M19.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
