EST details — SGN-E695276
| Search information |
| Request: 695276 | Match: SGN-E695276 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C468442 | Clone name: LH_Ea06B18 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C468442 [LH_Ea06B18] | Trace: SGN-T495984 | EST: SGN-E691436 | Direction: 5' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E695276 | Length: 786 bp (1072 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E695276 [] (trimmed)
TTTTTTTTTTTTTTAAGTAACACTAAGGTTTGTTTTGTAATAACCTTTTAAACATCACCAATTGACAAGAACATGATTGATTGTCCTTCAAGAGA
ATACTGATAAAAGAAATTAGGCGAATAGCTTCTGTTTTTTCAAGTGTTAAAACACTTTAAGCAACAATTTGCTCAATGGGCTTGGACTCCAACTT
GGCCTCTTCAGTTTGTATCTTCTCTTCCTTGGCCAGTTTCTTCAGCCTAGCTAGCTCAAGATCCTTACTCATTTTCCTCCTGTACATTTCTGCAA
ATGTAATCGGCTTATCCATTATCGCCTTCTCTCCTTCCCTAATTTTTAACGGATACACTTTTGCATCTGGTGCTGGATTCTGGAATGTGGCTATC
GATAATCTACTGCTATTCGAATTCACCACTGCTTGATGATCAGCATTCTTGAACCTTCCATTGCTCAAATAATGACCATGATCACCAAGATTAAC
CACAAAAGCACCTTCAACTGGCTGAACAGTGATCCATGTTTTGCCATTATCTTTAGTGGCTTGAAGCCCACCAACTTGGTCTTGTAACAACAGCG
TAATGGTTCCTGGATCAGTGTGTCGTTTGAGCCCAAGAGTAAGGTCAGGCTCTGGACACTTTGGGTAAAAATTGACAACTACTTTTTGGTCCATA
TCGACACATGCCTTGGTTAAAGCCTCTTTCTCTAAGCCCATTGCCTCTGATAGTACTTGTAATAATTTGCAAGCCAAGTCCATTAACTTTTCACT
GTATTTCTCAGTTACACCTATCCAGC
ATACTGATAAAAGAAATTAGGCGAATAGCTTCTGTTTTTTCAAGTGTTAAAACACTTTAAGCAACAATTTGCTCAATGGGCTTGGACTCCAACTT
GGCCTCTTCAGTTTGTATCTTCTCTTCCTTGGCCAGTTTCTTCAGCCTAGCTAGCTCAAGATCCTTACTCATTTTCCTCCTGTACATTTCTGCAA
ATGTAATCGGCTTATCCATTATCGCCTTCTCTCCTTCCCTAATTTTTAACGGATACACTTTTGCATCTGGTGCTGGATTCTGGAATGTGGCTATC
GATAATCTACTGCTATTCGAATTCACCACTGCTTGATGATCAGCATTCTTGAACCTTCCATTGCTCAAATAATGACCATGATCACCAAGATTAAC
CACAAAAGCACCTTCAACTGGCTGAACAGTGATCCATGTTTTGCCATTATCTTTAGTGGCTTGAAGCCCACCAACTTGGTCTTGTAACAACAGCG
TAATGGTTCCTGGATCAGTGTGTCGTTTGAGCCCAAGAGTAAGGTCAGGCTCTGGACACTTTGGGTAAAAATTGACAACTACTTTTTGGTCCATA
TCGACACATGCCTTGGTTAAAGCCTCTTTCTCTAAGCCCATTGCCTCTGATAGTACTTGTAATAATTTGCAAGCCAAGTCCATTAACTTTTCACT
GTATTTCTCAGTTACACCTATCCAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E695276] | SGN-U563669 | Tomato 200607 | Build 2 | 46 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T492169 [Download][View] | Facility Assigned ID: LH_Ea06B18.r |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 20.5 |
Working
