EST details — SGN-C70044
| Search information |
| Request: 70044 | Match: SGN-C70044 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C70044 | Clone name: cLER-13-G20 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185365 is on microarray TOM1: SGN-S1-1-6.4.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185365 [TUS-47-D3] | Trace: SGN-T192236 | EST: SGN-E390910 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185365 [TUS-47-D3] | Trace: SGN-T192237 | EST: SGN-E390911 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283902 | Length: 560 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283902 [] (trimmed)
AATCTCAAAAATATTTCAAATTCCAATGGCCATTTCTAAAGCTCTCTTTGCTTCATTACTTCTCTCCTTGCTCCTTCTCGAGCAAGTCCAATCTA
TTCAGACTGATCAAGTGAGCAGCAATGCTATTTCTGAAGGCGCTGATTCCTACAAGAAAATTGACTGTGGGGGAGCTTGTGCAGCAAGGTGCCGA
TTATCATCAAGGCCAAGATTGTGTCATAGGGCATGTGGAACTTGTTGTGCTAGATGCAACTGTGTTCCTCCTGGTACTTCTGGCAACACTGAGAC
TTGCCCTTGCTATGCCAGTTTGACTACTCATGGCAACAAACGTAAATGCCCTTAAATTTCTTCTAAAAATATCGTATATCGTGTGATTACCACGG
ATATGTTATTATTGTAGTGTATTATTTTGTCATATATTGTGTCAATAATCAAAATCCAGTAAAATATCTTTAGCGTGGGTAATTTATTTTTTGGG
GTTTGTCTTTGTAATTTTGAGGAAATTTTATTTGTGTGTTGATTAGTACATCTGGTGTAATATTTATTCTGGTTTGCATTGTATT
TTCAGACTGATCAAGTGAGCAGCAATGCTATTTCTGAAGGCGCTGATTCCTACAAGAAAATTGACTGTGGGGGAGCTTGTGCAGCAAGGTGCCGA
TTATCATCAAGGCCAAGATTGTGTCATAGGGCATGTGGAACTTGTTGTGCTAGATGCAACTGTGTTCCTCCTGGTACTTCTGGCAACACTGAGAC
TTGCCCTTGCTATGCCAGTTTGACTACTCATGGCAACAAACGTAAATGCCCTTAAATTTCTTCTAAAAATATCGTATATCGTGTGATTACCACGG
ATATGTTATTATTGTAGTGTATTATTTTGTCATATATTGTGTCAATAATCAAAATCCAGTAAAATATCTTTAGCGTGGGTAATTTATTTTTTGGG
GTTTGTCTTTGTAATTTTGAGGAAATTTTATTTGTGTGTTGATTAGTACATCTGGTGTAATATTTATTCTGGTTTGCATTGTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283902] | SGN-U578258 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94596 [Download][View] | Facility Assigned ID: TPRBX46TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0142 | Quality Trim Threshold: 12.5 |
Working
