EST details — SGN-C70598
| Search information |
| Request: 70598 | Match: SGN-C70598 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C70598 | Clone name: cLER-15-F20 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185376 is on microarray TOM1: SGN-S1-1-3.4.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185376 [TUS-47-D14] | Trace: SGN-T192468 | EST: SGN-E391142 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185376 [TUS-47-D14] | Trace: SGN-T192657 | EST: SGN-E391331 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282722 | Length: 513 bp (705 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282722 [] (trimmed)
TTTTGAAATGGAGCATAGAGAAGAGGATGTGAGATTAGGTGCTAATAAATACTCAGAGAGGCAAGCAATTGGAATAGCAGCACAGAGTGAAGACA
AGGACTACAAAGAGCCACCACCAGCTCCCCTGTTTGAACCAGGGGAGTTGATGTCGTGGTCCTTTTATCGTGCTGGAATTGCTGAATTTGTGGCT
ACTTTCCTCTTTCTTTATATCACTGTTTTAACCGTCATGGGCGTTTCTAAATCCGATTCCAAATGTTCAACGGTTGGAATTCAAGGCATTGCTTG
GGCTTTTGGTGGCATGATCTTTGCCTTAGTCTACTGCACTGCCGGCATTTCAGGGGGACACATAAATCCGGCAGTGACATTTGGGCTTTTCTTAG
CGAGGAAATTGTCATTGACAAGGGCAGTATTCTACATGGTGATGCAGTGCCTTGGAGCTATCTGCGGTGCTGCTCTTGTCAAAGCGTTTGGAAAG
ACACTNTACCAAACTAAGGGTGGAGGAGCCAATGTTGT
AGGACTACAAAGAGCCACCACCAGCTCCCCTGTTTGAACCAGGGGAGTTGATGTCGTGGTCCTTTTATCGTGCTGGAATTGCTGAATTTGTGGCT
ACTTTCCTCTTTCTTTATATCACTGTTTTAACCGTCATGGGCGTTTCTAAATCCGATTCCAAATGTTCAACGGTTGGAATTCAAGGCATTGCTTG
GGCTTTTGGTGGCATGATCTTTGCCTTAGTCTACTGCACTGCCGGCATTTCAGGGGGACACATAAATCCGGCAGTGACATTTGGGCTTTTCTTAG
CGAGGAAATTGTCATTGACAAGGGCAGTATTCTACATGGTGATGCAGTGCCTTGGAGCTATCTGCGGTGCTGCTCTTGTCAAAGCGTTTGGAAAG
ACACTNTACCAAACTAAGGGTGGAGGAGCCAATGTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282722] | SGN-U580424 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95242 [Download][View] | Facility Assigned ID: TPRCH34THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
