EST details — SGN-C71165
| Search information |
| Request: 71165 | Match: SGN-C71165 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71165 | Clone name: cLER-17-A8 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178845 is on microarray TOM1: SGN-S1-1-6.4.3.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178845 [TUS-30-D11] | Trace: SGN-T184747 | EST: SGN-E372307 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178845 [TUS-30-D11] | Trace: SGN-T184748 | EST: SGN-E372308 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283138 | Length: 613 bp (837 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283138 [] (trimmed)
TTTTGAGAAACCATCACCAATTCAATCTCATTCATGGCCTTTTCTTTTAGATGGGCGTGATTTCATTGGCATAGCTAGAACTGGATCAGGTAAGA
CATTGGCTTTTGGTATTCCGGCTATTATGCACATCACGACTGAGCGGAAGAGTAAGAAGTCTAAGAATCCTGTTTGCCTTGTGCTTTCACCTACA
AGAGAGTTAGCTCAACAAATATCAGATGTTCTCTGTGAGGCTGGGAAGCCTACTGGTGTGCAGTCAGTTTGTCTATATGGCGGAGTTGATAAGCA
CCATCAAAAGGCTTCTCTTAGATCTGGCGTGGATATTGTTATTGGAACCCCTGGTCGTTTGCAAGATCTGATGGAAATGGGAGCTTGCAATTTAA
AAGAGGTTTCTTTTGTGGTGCTAGATGAAGCTGATCGCATGCTTGATTTAGGTTTTGAACCAGCGGTCCGTGCCATATTAAGCCAAACATGCTCT
GTTCGGCAGATGGTTATGTTCAGTGCTACATGGCCTCCGGAAGTTCATCAATTAGCTCAAGAGTTCATGGATCCCAATCCAATCAAGGTAGTTGT
AGGTTCAGAAGATTTGGCTGCCAACCATGATGTCATGCAAATT
CATTGGCTTTTGGTATTCCGGCTATTATGCACATCACGACTGAGCGGAAGAGTAAGAAGTCTAAGAATCCTGTTTGCCTTGTGCTTTCACCTACA
AGAGAGTTAGCTCAACAAATATCAGATGTTCTCTGTGAGGCTGGGAAGCCTACTGGTGTGCAGTCAGTTTGTCTATATGGCGGAGTTGATAAGCA
CCATCAAAAGGCTTCTCTTAGATCTGGCGTGGATATTGTTATTGGAACCCCTGGTCGTTTGCAAGATCTGATGGAAATGGGAGCTTGCAATTTAA
AAGAGGTTTCTTTTGTGGTGCTAGATGAAGCTGATCGCATGCTTGATTTAGGTTTTGAACCAGCGGTCCGTGCCATATTAAGCCAAACATGCTCT
GTTCGGCAGATGGTTATGTTCAGTGCTACATGGCCTCCGGAAGTTCATCAATTAGCTCAAGAGTTCATGGATCCCAATCCAATCAAGGTAGTTGT
AGGTTCAGAAGATTTGGCTGCCAACCATGATGTCATGCAAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283138] | SGN-U574844 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95989 [Download][View] | Facility Assigned ID: TPRCN04THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
