EST details — SGN-C71382
| Search information |
| Request: 71382 | Match: SGN-C71382 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71382 | Clone name: cLER-17-L11 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178904 is on microarray TOM1: SGN-S1-1-3.2.2.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178904 [TUS-30-F22] | Trace: SGN-T184935 | EST: SGN-E372143 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178904 [TUS-30-F22] | Trace: SGN-T184936 | EST: SGN-E372144 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283190 | Length: 509 bp (802 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283190 [] (trimmed)
CTAGAAATGGCTGATCGTTCTAATATTCCAATTCTACGTCACCGAAGCACAACCTAATTTCACTTTTCAATCGCCCTGTGAAGGTAATGTGACAG
AGTACCCTCTAAATGGTACATACCACACAAACCTTAACACACTTCTCTCCTCTCTTTCACGTAACATAGACAGAGATGGCTTCTATAATGCTACC
GTAAGCCAAGATCAGAACAGGGTTAGTGCCATCGCGCAATGTAGAGCAGATGTTGAACTACAAACATGCCGCAGCTGTATAAATAATGCTACTCG
CTTGATTATAGAGAAATGTCCTTCCAAGAAATCAGCCTTTGGCATTTATGATATGTGTCTCATAAGATATTCAAATGAGTGCTTCAGTTTGATCA
AACTTATAGACTTTCTGGCCTATTCTTCAAAGGAAAACATAGTCTTTATTAGATCACGGGTCCTCCATCTTTTGTCACTCTCAACTTCAACTACC
ATTCAATTGCCAACCAAATCACGTCCTTAAAAAT
AGTACCCTCTAAATGGTACATACCACACAAACCTTAACACACTTCTCTCCTCTCTTTCACGTAACATAGACAGAGATGGCTTCTATAATGCTACC
GTAAGCCAAGATCAGAACAGGGTTAGTGCCATCGCGCAATGTAGAGCAGATGTTGAACTACAAACATGCCGCAGCTGTATAAATAATGCTACTCG
CTTGATTATAGAGAAATGTCCTTCCAAGAAATCAGCCTTTGGCATTTATGATATGTGTCTCATAAGATATTCAAATGAGTGCTTCAGTTTGATCA
AACTTATAGACTTTCTGGCCTATTCTTCAAAGGAAAACATAGTCTTTATTAGATCACGGGTCCTCCATCTTTTGTCACTCTCAACTTCAACTACC
ATTCAATTGCCAACCAAATCACGTCCTTAAAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283190] | SGN-U583045 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96041 [Download][View] | Facility Assigned ID: TPRCO66TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0175 | Quality Trim Threshold: 14.5 |
Working
