EST details — SGN-C71386
| Search information |
| Request: 71386 | Match: SGN-C71386 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71386 | Clone name: cLER-17-L15 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178905 is on microarray TOM1: SGN-S1-1-2.2.2.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178905 [TUS-30-F23] | Trace: SGN-T184763 | EST: SGN-E372323 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178905 [TUS-30-F23] | Trace: SGN-T184764 | EST: SGN-E372324 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283192 | Length: 554 bp (800 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283192 [] (trimmed)
TTTCAGTGCCAAACCCAATTAGTCCGGACGACGCAAATCACAGCGATTTCTTCAAAACCTATCTGGAAAAATGGCATCAGTTGATGTTGAGAAGA
GGAGGAGCGATATGGAGAGAGAGGAAGCCTGTTCGGCCAAACCAACAAAGCAAGGGGAAGGGCTGAGACAGTACTATATGCAGCACATCCATGAT
CTCCAGCTCCAAGTCCGCGTAAAGACTCACAATCTTAATCGCCTTGAAGCCCAGAGGAACGAACTCAATTCTAAAGTGAGAATGCTAAAAGAGGA
ATTACAATTGCTTCAGGAGCCTGGATCATATGTTGGTGAAGTTGTTAAAGTAATGGGGAAGTCAAAGGTTCTAGTCAAAGTTCATCCTGAAGGCA
AATATGTTGTTGATATTGGCAAAAACATTGACATTACAAAGATCACTCCATCAACTAGAGTTGCCCTGCGCAATGATAGCTATGTTCTTCATCTA
ATTTTGCCCAGCAAAGTTGATCCATTGGTCAACCTCATGAAAGTTGAGAAAGTGCCAGATTCCACTTATGACATGATTG
GGAGGAGCGATATGGAGAGAGAGGAAGCCTGTTCGGCCAAACCAACAAAGCAAGGGGAAGGGCTGAGACAGTACTATATGCAGCACATCCATGAT
CTCCAGCTCCAAGTCCGCGTAAAGACTCACAATCTTAATCGCCTTGAAGCCCAGAGGAACGAACTCAATTCTAAAGTGAGAATGCTAAAAGAGGA
ATTACAATTGCTTCAGGAGCCTGGATCATATGTTGGTGAAGTTGTTAAAGTAATGGGGAAGTCAAAGGTTCTAGTCAAAGTTCATCCTGAAGGCA
AATATGTTGTTGATATTGGCAAAAACATTGACATTACAAAGATCACTCCATCAACTAGAGTTGCCCTGCGCAATGATAGCTATGTTCTTCATCTA
ATTTTGCCCAGCAAAGTTGATCCATTGGTCAACCTCATGAAAGTTGAGAAAGTGCCAGATTCCACTTATGACATGATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283192] | SGN-U580275 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96043 [Download][View] | Facility Assigned ID: TPRCO68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
