EST details — SGN-C71401

Search information 
Request: 71401Match: SGN-C71401
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71401Clone name: cLER-17-M1
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178909 is on microarray TOM1: SGN-S1-1-6.3.3.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178909 [TUS-30-G3] Trace: SGN-T184433 EST: SGN-E371819 Direction: 3' Facility: INRA
Clone: SGN-C178909 [TUS-30-G3] Trace: SGN-T184434 EST: SGN-E371820 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E283122Length: 447 bp (614 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283122 [] (trimmed) TTTCACCGGAGATGCCAAAATTCATCTAGACACCTTTTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATATTACCACAACACAGGTAAGC
TATCAAATGATGGAGACAGATTCGTCGATGGAGCAATAATAGCAGCCGCAAGAACGTTGCCCACTTGGTCAGATGGAGATCTCCCTCCAATTCCA
AGTCTAGAGAGGAAAGCAGTGAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTTCCCACAACTTCTGACGAAGACCAGAAAATCCT
AGATTCGATGCCTGAATGCAGGAGAACATTCGAAGCAGCAATAAAGTATAGATTACATCGGAAATTACTGATAGAGAAGGTTATACAGGCCTTGG
ACATTTACCAAGACAGGATTCTGTTCTAAACATGAATAACAGCAGGAGTTGAAGCAATCTTTACCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283122] SGN-U584726 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T95973 [Download][View] Facility Assigned ID: TPRCM73TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5