EST details — SGN-C7182

Search information 
Request: 7182Match: SGN-C7182
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C7182Clone name: cLEC-38-B6
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C174180 is on microarray TOM1: SGN-S1-1-7.2.16.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174180 [TUS-18-B2] Trace: SGN-T197295 EST: SGN-E395969 Direction: 3' Facility: INRA
Clone: SGN-C174180 [TUS-18-B2] Trace: SGN-T199863 EST: SGN-E398537 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E209183Length: 432 bp (1027 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E209183 [] (trimmed) CTCAGTTTGGGCATGGCCAGTCAAATCCCACTTTCCTCATTGAGGTTGGCTCAGGAACCTTGCCAAAAAAATATGTGTTGAGAAAGAAACCCTGT
GGAAATTTACTGACATCTGCTCATGCTGTTGAGAGAGAGTATGAGGTTCTACATGCATTAAGTACTCACTCGGTGGTCCCGGTCCCAAAGGTTTT
TTCTTTGTGTACAGATTCAAGTGTGATTGGAACTCCATTTTACATTATGGAGTATCTGGAAGGACGTATCTTCGTAGACCCGACGCTACCTGATG
TACTCCCTGAAAGAAGAAGGGTCATATTTCGTGCTGTTGCTCAAGCTTTGGCCGGTCTTCACTCTGCTGATGTTGATTTAGTTGGTCTTGGTAAC
TATGGGAAACGGATGAACTATTGTAAACGGCAGGTGGAAAGGTGGGCCAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E209183] SGN-U584214 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T31718 [Download][View] Facility Assigned ID: TCAFV03TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5