EST details — SGN-C71867
| Search information |
| Request: 71867 | Match: SGN-C71867 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71867 | Clone name: cLER-19-G11 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184180 is on microarray TOM1: SGN-S1-1-7.2.16.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184180 [TUS-44-B18] | Trace: SGN-T198356 | EST: SGN-E397030 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184180 [TUS-44-B18] | Trace: SGN-T198357 | EST: SGN-E397031 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E284817 | Length: 517 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284817 [] (trimmed)
CTAATAACACATAGATGGGTTGTGAGGATATTTGCAACACTGGCCTAGTTTTAGGATTAGGCTTTTCTTCAACCGCCGATCACAAATCAAAGAAA
ATAACCACAACACCATTAGTAGGCAAAGGTCCGTGTGTTGGCTTTGAAGAACCTTCACTAACTTTAAGCCTAATTTCCGGTGATCGTACGTACGA
ACAACAGGCGATGAAAATTAGTAAAGATCATCAATCTGCTGATTTGTACAGACAAGATAGTGCTGCCTCTTCCTACTCAAATGCTAGTGTCAAAA
GGGAGAGAGATGTTGGTAGTGAAGAGACAACTACTGAAGTAGAAAGACTTTCCTCCAGAGTTATTAGTGACGAAGATGATGATGGATCTAACGCT
AGAAAGAAACTTAGACTCACTAAACCACAATCTGGACTTTTAGAGGAAAGTTTCAAGATACACAGCACTCTGAATCCTAAACAAAAAACAGGATT
TAACCAAAGAACTCAATTTAAGGCCACGCCAAGTTGAAGTTT
ATAACCACAACACCATTAGTAGGCAAAGGTCCGTGTGTTGGCTTTGAAGAACCTTCACTAACTTTAAGCCTAATTTCCGGTGATCGTACGTACGA
ACAACAGGCGATGAAAATTAGTAAAGATCATCAATCTGCTGATTTGTACAGACAAGATAGTGCTGCCTCTTCCTACTCAAATGCTAGTGTCAAAA
GGGAGAGAGATGTTGGTAGTGAAGAGACAACTACTGAAGTAGAAAGACTTTCCTCCAGAGTTATTAGTGACGAAGATGATGATGGATCTAACGCT
AGAAAGAAACTTAGACTCACTAAACCACAATCTGGACTTTTAGAGGAAAGTTTCAAGATACACAGCACTCTGAATCCTAAACAAAAAACAGGATT
TAACCAAAGAACTCAATTTAAGGCCACGCCAAGTTGAAGTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E284817] | SGN-U568678 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96389 [Download][View] | Facility Assigned ID: TPRCU42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0132 | Quality Trim Threshold: 14.5 |
Working
